Transcript Information: R_Transcript_403125.p1


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.098134198681284
Replicate 20.1128833355715
Replicate 30.12315450320512
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.097589304410683
Condition 3: 24 Hour
Replicate 10.24685814223338
Replicate 20.23715332140406
Replicate 30.11767583164999


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_403125.p1 GENE.R_Transcript_403125~~R_Transcript_403125.p1 ORF type:complete len:186 (+),score=22.46,zf-RVT|PF13966.2|2.7e-13 R_Transcript_403125:321-878(+)
ATGATAAACAAGATTTTGGAATGCAGGGAAATTATAAAGGAGGTGCAAGAAGGCTATAAGGAAAAGAAGGGAATGAAGAAATTGTACGTACAACTAAGAGGAGAGTTCCCAAAGGTCAGTTGGTGTAATGTCATATGTCAAAACTTTGCTAGGCCTAAAGTTGTATTGTCTCTTTGGATTTTTATGTTACATAGACATGCTACAATTGACAGAATGGAAAGATGGGGAATAGTTGGAGACAGACAATGTTACCTATGCAAAAGGACGATGGAAGGTCACACTCACCTCATGTTTGAATTCCCCTTCACTTTGAAGGTGTGGCAGGAAACTCTGGACAAGTTCAGACTAGTTAAAGATGGTGAGGTGCAGGCCAGAACCTGGCATGAGAGAAGTCAATGGCTCATAGACAGGAGTATAGAAAAATCAGGTAAAAAGGGTTTGTTTAAAATGATCAGTGCTGAGGTATGGTACACAATTTGGTGTGGAAGAAACAAGAGAATTTTTGAGCAAATTGAACAACCTCCTAGCAGTTTGAGTAGGCAGGTGATATATAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_403125.p1 GENE.R_Transcript_403125~~R_Transcript_403125.p1 ORF type:complete len:186 (+),score=22.46,zf-RVT|PF13966.2|2.7e-13 R_Transcript_403125:321-878(+)
MINKILECREIIKEVQEGYKEKKGMKKLYVQLRGEFPKVSWCNVICQNFARPKVVLSLWIFMLHRHATIDRMERWGIVGDRQCYLCKRTMEGHTHLMFEFPFTLKVWQETLDKFRLVKDGEVQARTWHERSQWLIDRSIEKSGKKGLFKMISAEVWYTIWCGRNKRIFEQIEQPPSSLSRQVIYN*

Click here to download the sequence:
Link to NCBI Protein BLAST