Transcript Information: R_Transcript_403211.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value5E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11930039839685
Replicate 20.13723072167515
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.14614955451755
Replicate 30.11863797791103
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.28611378675683


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_403211.p1 GENE.R_Transcript_403211~~R_Transcript_403211.p1 ORF type:3prime_partial len:153 (+),score=30.53,RVT_1|PF00078.23|2.3e-20 R_Transcript_403211:174-629(+)
ATGTATGGATACTTTGAAGTTAAGAGAGGAGTTAGGCAGGGGGATCCTCTCTCTCCATACCTTTTTGTATTGGTCATGGAGTTCCTCTCTAGAATGTTGAGGAGCTTGAAGCCTGTTATGGATTATGCTAGACATTCCAAGTGTGCAGCCTTGAACATAAATCATCTTCTCTTTGCTGATGATTTATTGATTTTTACAAGAGGGGATAAACATTCATTGGAGAATGTATACAAATGTTTGAAGCAGTTTGCTCAGTACTCGGGTCTGGAGCCTAGCCCACACAAAAATTCAATATATTTTGGGAGTCTGGATAACAAAACAAAGAGGGAAATCATAGTGAATACTGGCTTCAAGGAGGATAAACTGACTTTCAAATATCTGGGGCTGCCCCTTCATGGTTCAAGATTGAACTCTAGAATCTGTGCTGCTCTAATTGATAAGGTTACAATGAAGCTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_403211.p1 GENE.R_Transcript_403211~~R_Transcript_403211.p1 ORF type:3prime_partial len:153 (+),score=30.53,RVT_1|PF00078.23|2.3e-20 R_Transcript_403211:174-629(+)
MYGYFEVKRGVRQGDPLSPYLFVLVMEFLSRMLRSLKPVMDYARHSKCAALNINHLLFADDLLIFTRGDKHSLENVYKCLKQFAQYSGLEPSPHKNSIYFGSLDNKTKREIIVNTGFKEDKLTFKYLGLPLHGSRLNSRICAALIDKVTMKL

Click here to download the sequence:
Link to NCBI Protein BLAST