Transcript Information: R_Transcript_403242.p1


Annotated TAIR IDAT5G53110.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21529022-21533008 | Forward length=382
E-Value5E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8914985445304
Replicate 23.1548845185111
Replicate 32.2550674317456
Condition 2: 8 Hour
Replicate 11.5224371987925
Replicate 21.042735422646
Replicate 32.7274440828561
Condition 3: 24 Hour
Replicate 13.2117139644975
Replicate 24.1139343008331
Replicate 33.5156416854602


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_403242.p1 GENE.R_Transcript_403242~~R_Transcript_403242.p1 ORF type:internal len:193 (-),score=16.53,zf-RING_2|PF13639.2|8.8e+03,zf-RING_2|PF13639.2|1.1e+04,zf-RING_2|PF13639.2|2.9e-11,zf-rbx1|PF12678.3|2.5e-07,zf-RING_11|PF17123.1|1.7e+03,zf-RING_11|PF17123.1|2.1e-07 R_Transcript_403242:3-578(-)
CAGTCTATTGATCTCTCAAGAAGAAGGCCAAATAAGGTGGCTTACATGTGGTCATTGTTGACAAAACTTGATCACGCCTTGTGCAGCTTTGCAGGAGGAAGATGCGGTTTAGAGTCTAGTGCTGAGCTTGTATGGACAGGAATGTTGATGGTTTTGCCAGCTCATCTCTTAATCTCGGGGTTGGTTGTGTTCGTGATCTTATCTATTATCGGTTCGTTGTGCTTGATGAGTGTGAAGGAGCATCACTATGTGGAATGGACAACGAGTGATACGAACATACTAGAACTAATTGGTATGCCATCAGCTGAGCAGCAACTAGTTATCAACAACGGCCTTGACCAGCATATCATTGATACATACCCAAAGATTGTGCTAAACAAGAGCAAGACATTGCCGTGTCCTCCAAATTACAACAACGACAATAACAATAACGATAGCAACGACAATGTTTGTTGGATATGTCTAATGCAGTACCAGGCTGAGGAGGCGCTGAGAAGCCTGCCAGGATGCCAACATTTCTTTCATGTCGTTTGCATCGATCGATGGCTTCGTTTGAAAGCTGTATGCCCTGTTTGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_403242.p1 GENE.R_Transcript_403242~~R_Transcript_403242.p1 ORF type:internal len:193 (-),score=16.53,zf-RING_2|PF13639.2|8.8e+03,zf-RING_2|PF13639.2|1.1e+04,zf-RING_2|PF13639.2|2.9e-11,zf-rbx1|PF12678.3|2.5e-07,zf-RING_11|PF17123.1|1.7e+03,zf-RING_11|PF17123.1|2.1e-07 R_Transcript_403242:3-578(-)
QSIDLSRRRPNKVAYMWSLLTKLDHALCSFAGGRCGLESSAELVWTGMLMVLPAHLLISGLVVFVILSIIGSLCLMSVKEHHYVEWTTSDTNILELIGMPSAEQQLVINNGLDQHIIDTYPKIVLNKSKTLPCPPNYNNDNNNNDSNDNVCWICLMQYQAEEALRSLPGCQHFFHVVCIDRWLRLKAVCPVC

Click here to download the sequence:
Link to NCBI Protein BLAST