Transcript Information: R_Transcript_40387.p2


Annotated TAIR IDAT3G16190.1
Annotated Gene NameIsochorismatase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5489883-5491195 | Reverse length=196
E-Value4.3E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.82387513229
Replicate 28.6138668374556
Replicate 311.747044921104
Condition 2: 8 Hour
Replicate 110.673325746235
Replicate 210.779091759341
Replicate 312.194158929593
Condition 3: 24 Hour
Replicate 111.537769786231
Replicate 29.048311339724
Replicate 314.030579927498


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40387.p2 GENE.R_Transcript_40387~~R_Transcript_40387.p2 ORF type:complete len:195 (+),score=34.43,Isochorismatase|PF00857.16|3.2e-30 R_Transcript_40387:2112-2696(+)
ATGGCTACTAAATGGAAGAACACGGCTCTTCTGGTCATCGACATGCAAAAAGACTTCATATTGCCAGGTGGGCAACTGGTAGTAGATGGTGGTGCAGCCATTGTCCCTAATGTTATTAAAGCTGTTCAAGTTGCAAGACAGCGTGGCATGCTTGTAGTTTGGGTTGTTCGCGAGCATGATGCATTAGGGAGAGACGTTGAACTCTTTCGCAGGCACTTATATAATGATGGGAAGATGGGCCTACTGTTAAGGGACATGAAGGTGCAGAACTTGTTGATGGACTTGAGATCCATGAAGGGGACTATAAGTTGGTCAAGACACGCATGTGCGTTCTTTGCTACACACTTTCATTCTTTTCTTCAGTCTGCTGGAATTGATAGCTTAGTTATTGTTGGAGTACAAACACCCAACTGCATCAGGCAGACAGTCTTTGATGCGGTAGCACTAGATTATCGTTCTGTCTCTGTTATAGTTGATGCTACAGCTGCGAAGACTCCAGAAGTTCATGCTGCTAATATCTTCGACATGAAAAATATTGGAGTAGCAACTCCAACCTTGGAGTCATGGTGCAAAGTAGATGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40387.p2 GENE.R_Transcript_40387~~R_Transcript_40387.p2 ORF type:complete len:195 (+),score=34.43,Isochorismatase|PF00857.16|3.2e-30 R_Transcript_40387:2112-2696(+)
MATKWKNTALLVIDMQKDFILPGGQLVVDGGAAIVPNVIKAVQVARQRGMLVVWVVREHDALGRDVELFRRHLYNDGKMGLLLRDMKVQNLLMDLRSMKGTISWSRHACAFFATHFHSFLQSAGIDSLVIVGVQTPNCIRQTVFDAVALDYRSVSVIVDATAAKTPEVHAANIFDMKNIGVATPTLESWCKVDD*

Click here to download the sequence:
Link to NCBI Protein BLAST