Transcript Information: R_Transcript_404010.p1


Annotated TAIR IDAT5G55660.1
Annotated Gene NameDEK domain-containing chromatin associated protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22539375-22543142 | Forward length=778
E-Value0.0008
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.88320778813155
Replicate 20.13546000268579
Replicate 30.22167810576922
Condition 2: 8 Hour
Replicate 10.078986661120146
Replicate 20.1442637538141
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_404010.p1 GENE.R_Transcript_404010~~R_Transcript_404010.p1 ORF type:3prime_partial len:310 (+),score=67.37,RRM_6|PF14259.2|0.038,RRM_6|PF14259.2|0.00014,BRAP2|PF07576.8|2.8e+02,BRAP2|PF07576.8|0.23,BRAP2|PF07576.8|0.017,RRM_1|PF00076.18|3.8e+03,RRM_1|PF00076.18|1e+04,RRM_1|PF00076.18|6,RRM_1|PF00076.18|1.3e-05 R_Transcript_404010:72-998(+)
ATGAAGCAATTATTCAAGAATAATCAAGCATTGATCAAGAACAAGATTTCATTGTCAAGAAACACCAAGAAGAAAAATTATTCAAATCTCCTTGGATTCAAGACCTTGAATATCACTCAAGCAGAAACACATTTTGAGGAGTGGGGACAAATTGCCAAGAAGGGCATTCTTGGGAAGAGCAAATGGCATTTTGATGAGGAGGAAATAGAAGATTCTGATAGGGAGTTGGCATCAGAGAATAAAGAAAGAAAATATTTTTCAGAGGATGAATTGGACGAACAATGGGACAATAAGTTCAAATTAGGCAAAAATTGGGTTGGATTGGAGGAAGATAATAGCAGCGGCCAAGACAGATTAGAATCAATCTTCTCAACCACAAAGAAATTCAGATCAACAAATGAAGCATTCTACACTCCAATGATCACACAATCACTCCCAAAACTCAAAGACAGAAGCATGTATTTCACCATCGAAGATGTGCCACAAAACATCACTTTGGAGGATGTCAATCAGATTCTTGGAAAGCTCAATCAAAAGGGAGTCTCCATCGAAAAATTCCAAATCAAGGACAAATACAACATCTTTGTAGAAATGGACTCTAGCGAGTCAAAACAGAACTTTTTGACCACATCTAGATTAAACTTTGGTATTTGGATTAATGGAAAGAGATGTGATGTTTATGATTCATCAAAAAGACAAAAAAGTGTATTTTTGGCAAAGATCCCTGATGACTGCACCGAAGAAGAAATCAAACAATTCATCGACAAGGTATTGGAGAAATCTGAGGTTGAAGTCGAAGTAGCAAAGAATTTGAGCAAATCATATTGTTTTCTTGAATTCAGAGATCATGAACTTGCATCAAACTTTATCGAAAGAATTACATCAATTGGAGATCAATTTGCTTCTTGGTCTAGATCTGCCAATTAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_404010.p1 GENE.R_Transcript_404010~~R_Transcript_404010.p1 ORF type:3prime_partial len:310 (+),score=67.37,RRM_6|PF14259.2|0.038,RRM_6|PF14259.2|0.00014,BRAP2|PF07576.8|2.8e+02,BRAP2|PF07576.8|0.23,BRAP2|PF07576.8|0.017,RRM_1|PF00076.18|3.8e+03,RRM_1|PF00076.18|1e+04,RRM_1|PF00076.18|6,RRM_1|PF00076.18|1.3e-05 R_Transcript_404010:72-998(+)
MKQLFKNNQALIKNKISLSRNTKKKNYSNLLGFKTLNITQAETHFEEWGQIAKKGILGKSKWHFDEEEIEDSDRELASENKERKYFSEDELDEQWDNKFKLGKNWVGLEEDNSSGQDRLESIFSTTKKFRSTNEAFYTPMITQSLPKLKDRSMYFTIEDVPQNITLEDVNQILGKLNQKGVSIEKFQIKDKYNIFVEMDSSESKQNFLTTSRLNFGIWINGKRCDVYDSSKRQKSVFLAKIPDDCTEEEIKQFIDKVLEKSEVEVEVAKNLSKSYCFLEFRDHELASNFIERITSIGDQFASWSRSANY

Click here to download the sequence:
Link to NCBI Protein BLAST