Transcript Information: R_Transcript_404093.p1


Annotated TAIR IDAT5G40390.1
Annotated Gene NameRaffinose synthase family protein
Annotated Gene Symbol(s)SIP1
Annotation TypeHomolog
Chromosome Positionchr5:16161720-16165085 | Forward length=783
E-Value3E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.24283966475
Replicate 213.826831981465
Replicate 311.732719256566
Condition 2: 8 Hour
Replicate 13.583297309353
Replicate 22.9996304908908
Replicate 36.1981109435468
Condition 3: 24 Hour
Replicate 14.4795721419911
Replicate 23.7655320057083
Replicate 39.6092362040037


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_404093.p1 GENE.R_Transcript_404093~~R_Transcript_404093.p1 ORF type:5prime_partial len:82 (-),score=26.98,Raffinose_syn|PF05691.8|8e-13 R_Transcript_404093:124-369(-)
GTGAACATGCTCAACTCCGGAGGGGCTATTCAGTCCTTTGACATCGCCGATGACAATGAGGAGAAAATGGTTCAGGTTGGAGTCAAGGGGGCTGGAGAACTGAGGGTTTTCGTGTCAGAGAAACCGAAGGCTTGCAGATTAAATGGGGAGGATATGAGGTTTGAGTGTGATGACAGTATGGTTATAATTCAAGTGCCTTGGAATGATGGTGCTGCTGGTTCATCAACTGTTGAGTACTTGTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_404093.p1 GENE.R_Transcript_404093~~R_Transcript_404093.p1 ORF type:5prime_partial len:82 (-),score=26.98,Raffinose_syn|PF05691.8|8e-13 R_Transcript_404093:124-369(-)
VNMLNSGGAIQSFDIADDNEEKMVQVGVKGAGELRVFVSEKPKACRLNGEDMRFECDDSMVIIQVPWNDGAAGSSTVEYLF*

Click here to download the sequence:
Link to NCBI Protein BLAST