Transcript Information: R_Transcript_40410.p1


Annotated TAIR IDAT1G71970.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22680.1); Has 58 Blast hits to 58 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27093099-27093776 | Forward length=225
E-Value4.4E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.007990118324
Replicate 212.971047812735
Replicate 316.085620178632
Condition 2: 8 Hour
Replicate 114.582692901915
Replicate 217.292415290517
Replicate 323.314735419075
Condition 3: 24 Hour
Replicate 119.284558071271
Replicate 215.977809774063
Replicate 320.039409624448


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40410.p1 GENE.R_Transcript_40410~~R_Transcript_40410.p1 ORF type:complete len:225 (+),score=52.42,DUF688|PF05097.8|8.9e-06 R_Transcript_40410:98-772(+)
ATGACATCCACTACTGCAGAAGTAGAAGCAAGAAGAAGCAACAATGGCAGAACCCCAACAACAAAAACAACCCCAAGATTTCCATCTTCTTCTCGTCGTCGAACCCCTTCTTTCTCTTCTACTTCATCATTGTCTTCTTCCAATTCCTCTTCATCTTTCAGATCCTTTTGTCAGGAAGATTCTCCCACCTCAACCCCTTCTTCAACTCCATTCCACCCTTCCACCACCAATGGTGAAGGTATCCCATTCTCCTGGGAATCAATCCCTGGTATTCCCAAGAAACCCATTCTCAAAAAGATTGATTCCTCTAGGAAAAACCCCACTACTTACCTTCCCCTGCCTCCTGTACTTCCTACCACTACTAGTAGTACTATTACTAAATCATATCACCATAACAAGAAGCACATTCTAAGTACTCCTAGAAGAGACCCTTTCTTCACTGCCCTTGTTGAGTGCTCAAAAGCCGCCGCCACCGACAATGACGACGATGACGATGATCATAATAAGGCCGTGTTTGGGAGCATTCGGAAAGGAGCAAAATCAGCTAGGAGTAGATTTGGGTTTGTCAATACCATGTCTTGTAAGAACTCTTCTGCTGTTACTGAGTCTCTTGTTTTCCTCCCTAGAGCTCCTCCTCGAATTGCCTATGATATGCTCAAGAAACGATCTGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40410.p1 GENE.R_Transcript_40410~~R_Transcript_40410.p1 ORF type:complete len:225 (+),score=52.42,DUF688|PF05097.8|8.9e-06 R_Transcript_40410:98-772(+)
MTSTTAEVEARRSNNGRTPTTKTTPRFPSSSRRRTPSFSSTSSLSSSNSSSSFRSFCQEDSPTSTPSSTPFHPSTTNGEGIPFSWESIPGIPKKPILKKIDSSRKNPTTYLPLPPVLPTTTSSTITKSYHHNKKHILSTPRRDPFFTALVECSKAAATDNDDDDDDHNKAVFGSIRKGAKSARSRFGFVNTMSCKNSSAVTESLVFLPRAPPRIAYDMLKKRSG*

Click here to download the sequence:
Link to NCBI Protein BLAST