Transcript Information: R_Transcript_40414.p1


Annotated TAIR IDAT1G71970.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22680.1); Has 58 Blast hits to 58 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:27093099-27093776 | Forward length=225
E-Value5E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5341750142295
Replicate 27.4891262631382
Replicate 36.8574310001221
Condition 2: 8 Hour
Replicate 110.293420933237
Replicate 27.6910039453759
Replicate 36.5900751933889
Condition 3: 24 Hour
Replicate 18.1887720047862
Replicate 27.7263645795016
Replicate 39.3406128281664


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40414.p1 GENE.R_Transcript_40414~~R_Transcript_40414.p1 ORF type:5prime_partial len:157 (+),score=29.60 R_Transcript_40414:1-471(+)
GTAACGGCGAGAATCTTCTGGCGAAATCAAAGGGGTTTTGAGGTGAATTGGGAATCAATCCCTGATATTTTCAAGAAACCCATTCTCAAAAAGATTGATTCCTCTAGGAAAAACCCCACTACTTACCTTCCCCTGCCTCCTGTACTTCCTACCACTACTAGTAGTACTATTACTAAATCATATCACCATAACAAGAAGCACATTCTAAGTACTCCTAGAAGAGACCCTTTCTTCACTGCCCTTGTTGAGTGCTCAAAAGCCGCCGCCGCCGACAACGACGACGACGAGGATGATCATAATAAGGCCGTGTTTGGGAGCATTCGGAAAGGAGCAAAATCAGCTAGGAGTAGATTTGGGTTTGTCAATACCATGTCTTGTAAGAACTCTTCTGCTGTTACTGAGTCTCTTGTTTTCCTCCCTAGAGCTCCTCCTCGAATTGCCTATGATATGCTCAAGAAACGATCTGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40414.p1 GENE.R_Transcript_40414~~R_Transcript_40414.p1 ORF type:5prime_partial len:157 (+),score=29.60 R_Transcript_40414:1-471(+)
VTARIFWRNQRGFEVNWESIPDIFKKPILKKIDSSRKNPTTYLPLPPVLPTTTSSTITKSYHHNKKHILSTPRRDPFFTALVECSKAAAADNDDDEDDHNKAVFGSIRKGAKSARSRFGFVNTMSCKNSSAVTESLVFLPRAPPRIAYDMLKKRSG*

Click here to download the sequence:
Link to NCBI Protein BLAST