Transcript Information: R_Transcript_40446.p1


Annotated TAIR IDAT5G39590.1
Annotated Gene NameTLD-domain containing nucleolar protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15851483-15853768 | Forward length=542
E-Value5.9E-229
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.483135880245
Replicate 236.853926925739
Replicate 341.871589181495
Condition 2: 8 Hour
Replicate 135.815844521305
Replicate 240.317995365656
Replicate 340.259786462044
Condition 3: 24 Hour
Replicate 145.959510836341
Replicate 241.453765754183
Replicate 331.304021234798


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40446.p1 GENE.R_Transcript_40446~~R_Transcript_40446.p1 ORF type:5prime_partial len:523 (+),score=112.73,TLD|PF07534.12|2e-24 R_Transcript_40446:3-1571(+)
GAAAACCAAGCAGCTTCAACTGGGGCTCTTCCTTTGCTTCAGAAATCTTTCTCCAATCTCACTGATCCTCAATCTAGCTCTTCTTCTATCCCTGTCTCCTCTCTTCAGCAATGCTTCTCATTGAAATATAACAACATAAGTTGTGAAGGAGGAGTCAAGGTGCCTGAGTGTTTCCCAAGGTTTTTGAATGAATTGGGGAATTCCATAACTGATACCCTATTTGTGCCCGAAAAGGGAGGGCTTACTTGGGTTGAATTTGTGAGGGGATATGTCAGGTGCTGTGGAATGTTGTCGGCCTCGTTGCTGTTGAATATTCTGTTGAGGGTGATGGCTTTGTCTGCTGAGAGAGCTGGGTGCCCTTTGAAGTTGAATTTTGATTCGGATGATGTCGATAGTAAGACGAATGGATCTATTTCACCTCAGGAGGTAGGAATGATTCTCTGGCTATGTTGGATTATGGCTTGGAATTCAAGAAGTTTACAATGTGACACAGAGAAGGAGGACTTGAGCCTTCCTGATCTTAATCATTTGGTATTATCAGCTCTTGTGTCGTGCACCGATAGCTGCAGTGACATCGATTTGTGGGATTCTGATGTCTTTAGCCATGAAGCAGAACTTGCTGCTGGCAAGATACACATGTGGGTGTTGAGAACAGTGCCAAACCTTGCTGATTGTTTCCCGCATTTCATCAAATCCAGACTTAAAAGAGCTGCTGATTTGGAGCCTACCAGAACAGGAGCTTCAAGCACATCAGCTGAGGAAACATCATGTGCTCAATCATCTGAATCCCATCTTCTAACTTGTGGAAGGGCATGGGCAATTTCGCTTTCTCAAAGGAGCAACTTAAGTGAAGAGATGTTACAAATATGCTTCCCTGGCAATGTTGATGTGGTTGAGCAAAGCCTTCTTTATCGGTCTTATGTTCACGGAAAAGGCATGAACAGATTTTGGTCGAATGTTGAAGGTTATCACGGGCCTCTGCTCCTGTTGATATCAGCGAGTTCCGGTGAATCTAGTGAGAGCAGCAGAAAATGGATCATAGGGGCACTTACACAACAGGGTTTTGAAAACAGAGATGTATTCTATGGAACAGGAGGTTGTCTATACTCTATAAGTCCAGTCTTCCATGTTTTCTCAGCATCTGGAAAGGAGCAGAATTGCGTGTATAGTCACTTGCATCCTGCTGTTAGAGTGTACGAGCGTCATCCAAAGCCTGTAGGGATTGCATTTGGAGGCACTAGCGGAAATGAAAGGATATTTATTGATGAGGATTTTGGAAAGGTTACTATACGGCATCATGCTGCTGACAAAACTTACCAAACTGGTTCTCTTTTCCCCGACCAGGGGTACCTAGCTGTTGAGGCATCAATCTTGGAAGTTGAAGCATGGGGATTGGGTGATAAGACAGCAAGGGAAGTTCAAATCTCATACAAGAAAAGAGAGGAACTTTTCACTGAACAAAGGCGCAAGGTTGATTTGAAGACATTTGGTAGCTGGGAAGATTCTCCAGAAAAGATGATGATGGATATAATGTCTGATCCAAATAGAGTTCGACGTGAGGACCGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40446.p1 GENE.R_Transcript_40446~~R_Transcript_40446.p1 ORF type:5prime_partial len:523 (+),score=112.73,TLD|PF07534.12|2e-24 R_Transcript_40446:3-1571(+)
ENQAASTGALPLLQKSFSNLTDPQSSSSSIPVSSLQQCFSLKYNNISCEGGVKVPECFPRFLNELGNSITDTLFVPEKGGLTWVEFVRGYVRCCGMLSASLLLNILLRVMALSAERAGCPLKLNFDSDDVDSKTNGSISPQEVGMILWLCWIMAWNSRSLQCDTEKEDLSLPDLNHLVLSALVSCTDSCSDIDLWDSDVFSHEAELAAGKIHMWVLRTVPNLADCFPHFIKSRLKRAADLEPTRTGASSTSAEETSCAQSSESHLLTCGRAWAISLSQRSNLSEEMLQICFPGNVDVVEQSLLYRSYVHGKGMNRFWSNVEGYHGPLLLLISASSGESSESSRKWIIGALTQQGFENRDVFYGTGGCLYSISPVFHVFSASGKEQNCVYSHLHPAVRVYERHPKPVGIAFGGTSGNERIFIDEDFGKVTIRHHAADKTYQTGSLFPDQGYLAVEASILEVEAWGLGDKTAREVQISYKKREELFTEQRRKVDLKTFGSWEDSPEKMMMDIMSDPNRVRREDR*

Click here to download the sequence:
Link to NCBI Protein BLAST