Transcript Information: R_Transcript_40456.p1


Annotated TAIR IDAT5G08560.1
Annotated Gene Nametransducin family protein / WD-40 repeat family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2771104-2773827 | Reverse length=589
E-Value2.1E-284
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.390076615456
Replicate 220.923774335413
Replicate 328.920250747474
Condition 2: 8 Hour
Replicate 125.500823079774
Replicate 233.290293863734
Replicate 338.967965459656
Condition 3: 24 Hour
Replicate 128.588219362996
Replicate 224.493145883664
Replicate 328.125133483681


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40456.p1 GENE.R_Transcript_40456~~R_Transcript_40456.p1 ORF type:complete len:579 (+),score=102.57,WD40|PF00400.28|0.035,WD40|PF00400.28|0.32,WD40|PF00400.28|1.1,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|0.026,WD40|PF00400.28|4.8e-06 R_Transcript_40456:412-2148(+)
ATGGGAGGTACAGAGGAAGTTGAACCACCTTTGAAACGTGCTAAAGCATCCTCCGGGGAAGTGAATACAATTGAAAATAATTTTAATAACATCAAGCCAATAGCCACCTCTTTGGGAGATACAATGGCCAGGTCTTTGCCCTCCCAAGGAGATGAGGAAATGATTGGATCAAAAGGGGTTATAAGGAAAGAAGAATTTGTAAAAATAATCACCAGGGCATTATATTCTCTTGGCTATGATAAGACTGGGGCACTTTTAGAGGAAGAATCAGGAATACCGCTACATCCATCTTTAGTAACTTTGCTTATGCAGCTCGTGCTGGATGGAAAATGGGATGACAGTGTGGCTGCCTTGCGTGCAATCGGTGTCTCATATGAAACGGAAAAATCTGCTTCTTTCATAATTTTAGAGCAAAAGTTTCTCGAACTTCTACAGAAAGGTAATACTATGGATGCGCTGTCAACACTAAGGAATGAGATCTCACCCCTTCGAATAAACATGAACAGGGTTCACGAGCTTGCTGCCTGTGTTATCTCTCAGACACAATGTACAAGTCCTAGTAAAGAAACTATGCTTGCTAGCTCACGGTCACTGATTCTGGAAAAACTGCAGAAGTTGCTTCCTGCTTCAATGATTGTACCTGAAAGAAGGTTGGAGCATCTAGTTGAGCAGGCTCTTGATGTGCAACGGGATTCCTGTGAGTTTCACAACACATTTGACAGTGAACTATCGTTGTACACAGACCATCATTGTGGAAGAAGCCAGATACCTTCTGAAACTCTACAGATACTACAAGGGCACAATGATGAAGTGTGGTATTTGCAATTTTCACATAACGGAAAGTACCTAGCCTCAGCTTCTAAAGACCAGTTGGGAATTATTTGGGAGGTTCAGTGCAATGGGCAATTGTCTCTGAAGCACATGTTAATTGGTCACCAGAAGCCTGTCTTGTCTGTTTCATGGAGTCCTGATGACAGTCAGCTTCTCACATGTGGGCTTGAAGAAGTTGTGAGACGCTGGGATGTCAAATCTGGTGAATGCCTACAAGTATATGAAAAACCTGGTGTTGGTTTGATTTCATGTGGTTGGTTTCCTGATGGAAAAGGAGTATTCTCTGGTGTTACGGATAAAAGCATCTGCTTATGGGATCTGGATGGAAAAGAAGTGGAATGTTGGAAAGGTCAGAGGACAATAAGGATATCTGACATGGCAATAACGAATGATGGGAAGAGAATTATAAGCATATGCCGGGATAGTGCTATTTTGTTGCTTGACAGGGAAGCAAAATTTGAGAGACTGATTGAAGAAGAGCAAGTAATTACATCCTTCACCTTATCAAATGATAGTAAATTCTTGCTGGTCAACCTTATTAACCAAGAGATACATCTATGGAGTATAGAGGGTGATTTAAAGGTTCTCTCCAAGTACAAGGGTCATAAACGTACTCGTTTTGTAATTCGCTCATGCTTTGGGGGCATTCAGCAAGCCTTTATTGCCAGTGGTAGTGAGGATTCCCAGGTATACATATGGCATCGGAGTACCGGGGAGCTGCTCCTGGCATTGCCCGGGCATGCAGGGGCCGTCAATTGCGTAAGTTGGAATCCAACGAATCCTCATATGCTGGCATCAGCTAGCGATGATCAAACAATAAGAATATGGGGTTTAGGTAGGATAAATCTCAAGTGTAAGAGTGTGCACAGCAATGGCTTCATCCATCAGTCTAATGGGAAGAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40456.p1 GENE.R_Transcript_40456~~R_Transcript_40456.p1 ORF type:complete len:579 (+),score=102.57,WD40|PF00400.28|0.035,WD40|PF00400.28|0.32,WD40|PF00400.28|1.1,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|0.026,WD40|PF00400.28|4.8e-06 R_Transcript_40456:412-2148(+)
MGGTEEVEPPLKRAKASSGEVNTIENNFNNIKPIATSLGDTMARSLPSQGDEEMIGSKGVIRKEEFVKIITRALYSLGYDKTGALLEEESGIPLHPSLVTLLMQLVLDGKWDDSVAALRAIGVSYETEKSASFIILEQKFLELLQKGNTMDALSTLRNEISPLRINMNRVHELAACVISQTQCTSPSKETMLASSRSLILEKLQKLLPASMIVPERRLEHLVEQALDVQRDSCEFHNTFDSELSLYTDHHCGRSQIPSETLQILQGHNDEVWYLQFSHNGKYLASASKDQLGIIWEVQCNGQLSLKHMLIGHQKPVLSVSWSPDDSQLLTCGLEEVVRRWDVKSGECLQVYEKPGVGLISCGWFPDGKGVFSGVTDKSICLWDLDGKEVECWKGQRTIRISDMAITNDGKRIISICRDSAILLLDREAKFERLIEEEQVITSFTLSNDSKFLLVNLINQEIHLWSIEGDLKVLSKYKGHKRTRFVIRSCFGGIQQAFIASGSEDSQVYIWHRSTGELLLALPGHAGAVNCVSWNPTNPHMLASASDDQTIRIWGLGRINLKCKSVHSNGFIHQSNGKR*

Click here to download the sequence:
Link to NCBI Protein BLAST