Transcript Information: R_Transcript_40470.p1


Annotated TAIR IDAT5G13000.1
Annotated Gene Nameglucan synthase-like 12
Annotated Gene Symbol(s)ATGSL12, gsl12
Annotation TypeOrtholog
Chromosome Positionchr5:4110445-4121202 | Reverse length=1955
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.408246055187
Replicate 220.324938566989
Replicate 327.785790008329
Condition 2: 8 Hour
Replicate 130.951446614594
Replicate 234.158293972971
Replicate 345.542849751512
Condition 3: 24 Hour
Replicate 146.27081518611
Replicate 231.860123853794
Replicate 350.277378378257


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40470.p1 GENE.R_Transcript_40470~~R_Transcript_40470.p1 ORF type:complete len:1939 (+),score=314.33,Glucan_synthase|PF02364.11|1.3e-27,Glucan_synthase|PF02364.11|7.9e-221,FKS1_dom1|PF14288.2|1.2e-38,Vta1|PF04652.12|2.9e-20 R_Transcript_40470:798-6614(+)
ATGGCGTCATCGCCAAGAGGAGGAGGTTCTGATCAGCCGCCGGCGAGGCGGTTGATGAGGACTCAAACGGCGGGGAATCTCGGCGAGACGGCGTTTGATAGTGAGATTGTTCCGTCTTCTCTTGTTGAGATCGCTCCTATTCTTCGTGTTGCTAATGAAGTTGAGAAGCACAATCCAAGAGTTGCTTACTTATGTCGATTTTATGCATTCGAGAAAGCACACAGGTTGGACCCAACTTCGAGTGGACGTGGTGTTCGTCAATTCAAAACTGCCCTCCTTCAAAGGCTAGAAAGGGAGAATGATCCAACATTGATGGGCCGAGTTAAGAAAAGTGATGCCCGAGAAATGCAAAGCTTTGATCAGCATTACCACAAGAAATATATCCAGGCTTTGCAACATGCAGCTGACAATGCAGACCGTGCCCAACTCACAAAGGCTTATCAAACTGCTAATGTTCTGTTTGAGGTGCTGAAGGCTGTTAACCTGACACAGTCCATGGAAGTTGACCGTGAGATTATGGAAACGCATAATAAAGTGGCTGAGAAAACAGAAATATATGTCCCATATAATATTCTTCCTCTTGACCCTGATAGTGCAAATCAGCCAATTATGAGATTTCCAGAGATCCAAGCTGCTGTTCTGGCCGTTCGAAGTACAAGAGGCCTTCCATGGCCTAAGGGTTACAAGAAGAAACCAGATGAAGACATCTTGGACTGGCTTCAGGCAATGTTTGGATTTCAGAAAGATAATGTATCAAATCAGAGAGAGCACCTTATTTTGTTACTTGCTAATGTGCACATACGACAGTTTCCAAAGCCTGATCAACAGCCAAAGCTTGATGAACGTGCATTGACAGAAGTGATGAAAAAGCTTTTCAAGAGTTACAAAAGATGGTGCAAGTACTTAGATCGCAAGAGTAGTCTTTGGCTGCCAACAATACAACAAGAAGTACAACAACGTAAACTATTGTACATGGGTTTGTATCTGCTAATATGGGGGGAAGCTGCAAATCTCAGATTCATGCCGGAATGCCTTTGCTATATTTATCACCATATGGCATTTGAGTTATATGGCATGCTTGCTGGAAGTGTCAGTCAGATGACCGGTGAGAATGTGAAGCCAGCATATGGTGGTGAGGAGGAGGCTTTCTTGAGAAAAGTTGTAACCCCTATATATAATGTGATAGCAAAGGAAGCAGAAAGGAGCAAAAAAGGAAAATCAAAGCATTCACGATGGAGAAACTACGATGATTTAAATGAATACTTTTGGTCAGTTGATTGCTTCCGATTAGGCTGGCCAATGCGTGCTGATGCGGACTTCTATTGTTTGCCACCGGAAGATTTTCGCCGGGATAGGAATGGGGAGAGCAAACCTGCTGGTGGTGATCGATGGGTTGGAAAAGTTAATTTTGTTGAGATACGGTCGTTTTGGCACATCTTCAGAAGCTTTGACAGGATGTGGAGCTTTTTTATTTTGGCCTTGCAGGCGATGATTATTGTTGCATGGAATGGCTCAGGGGATCCTAGTGCCATATTTGAAACTAATGTTTTTAAAAAAGTTTTGAGCGTCTTCATAACAGCTTCAATATTGAAGCTTGGGCAATCTGCCCTGGATGTAGTTCTTAGTTGGAAAGCAAGACGGAGCATGTCATTTCATGTGAAACTAAGATACATTTTGAAAGTTGTGTCAGCTGCTGCCTGGGTAGTAATTCTGCCAGTTACCTATGCTTACTCATGGGAAAATCCTCCAGGTTTTGCTCAAACTATTAAAACTTGGTTTGGCAGCAATGCAAATTCACCCTCACTGTTTTTCTTGGCAATTGTACTCTACCTGTCACCAAATATGCTCTCTGCTGTGCTGTTTCTCTTTCCCTTCATTCGTCGTTATCTTGAAAGATCTGACTACAAGATTGTGATGCTGATGATGTGGTGGTCCCAGCCACGACTTTACGTTGGGAGGGGAATGCATGAAAGTGCTTTTTCTCTGTTTAAGTACACAATGTTCTGGGTCCTTCTCTTAGTTACGAAATTGGCCTTTAGTTATTATATAGAGATAAAGCCTTTAGTAGCTCCAACGAAGGACATCATGGCAATTCGTATAATAGATTTTAAGTGGCATGAGTTTTTCCCTCAAGCAAGGAACAACATTGGTGCGGTGATTGCTCTCTGGGCTCCAATTATTCTTGTCTACTTCATGGATACCCAGATTTGGTATGCTATATTCTCTACCCTGTTTGGAGGTATATATGGTGCATTCCGTCGTCTTGGAGAGATCCGCACATTAGGCATGTTGCGATCACGATTTGAGTCGCTACCCGGAGCCTTCAATGCCTCTCTTGTTCCAGTAGATAAGTCTGGGCACAAGAAGAAAGGATTGAAGGCCACTTTTTCTCGACGATTTCCTAATATTCCTTCAAATAAAGAGAAAGAGGCAGCACGCTTTGCTCAGTTGTGGAACAAAATAATTGCAAGTTTTAGAGAGGAAGATCTCATCAGTAACAGGGAGATGGACTTATTGCTCGTGCCTTATTGGGCTGACCGTGATTTGGACCTAATACAGTGGCCTCCTTTCTTACTTGCTAGCAAGATTCCTATTGCGCTGGATATGGCGAAGGATAGCACTGGCAAAGATAAGGAGTTGATAAAGAGAATTGAAGCTGATCAGTATATGTCATGTGCTGTTCGTGAATGCTATGCTTCTTTTAAGAGCATCATTAAGTTCATGGTCCAAGGGGATAATGAGATAAATGTCATTGATAAGATATTTGAAGAGGTTGAGTTGCATATACAACATGGTGACTTGGTCACTGAGTATAAGATGAGTGCTCTTCCTAGCCTGTATAGTCACTTTGTTAAGCTGATGAACTGCTTGTTGTCAAACAAACCGGAGGACAGAGATCAAGTCGTCATTTACTTCCAGGATATGTTGGAGGTTGTGACGAGAGATATAATGGAGGATACTAGTGTTCTAGAGTCAGCTCATGGTGGGTTGACACACGAGGGAATAGATTCTCAGTTATTTGCAGCAAAAGAAGCAATTAAATTTCCTATTGAACCGGTGACAGAAGCCTGGAAGGAAAAGATCAAACGTCTTTACCTGCTGCTTACTGTAAAGGAGTCTGCAATGGATGTTCCATCAAACTTAGATGCTAGACGCCGGCTTTCTTTCTTTTGCAACTCATTATTTATGGAAATGCCGCCGGCTCCTAAAGTTCGCAACATGCTTTCGTTTTCAGTGTTAACCCCTTACTACACGGAGGAGGTTCTTTTCTCGTTGATTGATTTAGAATCACAAAATGAAGATGGAGTATCTATCCTGTTTTACTTGCAGAAGATTTTTCCAGATGATTGGGAAAACTTCTTGCAACGTATTGGACGCAAGAGTGAAGAAGATCTTAGAGAGGAAGATATGGAAGAGCTACGTCTTTGGGCATCATATAGAGGACAGACATTGACTCGTACTGTCAGAGGCATGATGTACTATCGAAAAGCCTTAGAACTCCAAGCCTTCCTTGATATGGCCGAAGATGATGTTCTGATGGAAGGTTACAAGGCTATAGAATTAAACACTGAGGAGAACTCAAAAGGTGAACGATCGCTTTGTCAAGCTGTTGCCGACATGAAGTTTACTTATGTAGTGTCCTGCCAGCAATACGGGATTCACAAAAGAGCCGGTAATCAACGTGCACAGGACATATTGAGGCTTATGACAACATATCCATCGCTTCGTGTAGCTTATGTTGATGAGGTTGAAGAGCCTAGCAAAGACAGGACTAGAAAGATAGAAAAGGTTTATTACTCAGCTCTTGTGAAAGCAGCATTGCCGAAATCTAGTGGCTCAAAAGAGCCTGAGCAAAGCCTAGATCAGGTCATCTATCGGATAAAACTTCCTGGACAACCTATCTTAGGTGAAGGGAAGCCTGAGAATCAGAATCATGCTATAATTTTCACACGCGGGGAAGGATTGCAAACAATAGACATGAATCAGGATAACTATATGGAAGAGGCCTTGAAAATGAGGAATCTGCTTCAAGAATTTCTTACAAAGCATGGTGGTGTACGGCATCCTACTATACTAGGACTTAGAGAGCATATCTTCACTGGAAGTGTTTCATCTCTTGCATGGTTCATGTCAAATCAGGAGACCAGTTTTGTCACTATCGGTCAAAGACTGCTAGCCAACCCATTAAAGGTTCGTTTCCACTATGGTCATCCAGATGTTTTTGATAGACTCTTTCATCTCACCAGAGGTGGTGTTAGTAAAGCTTCCAAGGTCATCAATTTGAGTGAGGATATATTTGCTGGGTTTAATTCTACCCTCCGAGGAGGCAATGTTACACATCATGAGTACATCCAAGTTGGAAAGGGAAGAGATGTGGGTCTAAACCAAATTTCAATGTTTGAAGCGAAGATAGCTAATGGAAATGGGGAGCAGACACTGAGTCGTGATGTTTATAGGCTTGGGCATCGTTTTGACTTTTTCCGGATGTTGTCTTGTTATTTCACGACAATTGGTTTCTACTTTAGCACTTTGATTACTGTGCTTACTGTGTATATTTTTCTCTATGGACGCCTGTATCTTGTGCTCAGTGGCCTTGAGCAAGGCTTGAACAGTCAACGCCGGTTTCGTAATAATAAGCCTCTTCAAGTTGCTCTTGCTTCACAGTCATTTGTTCAAATTGGGTTCTTGATGGCATTGCCTATGTTGATGGAAATTGGTCTGGAAAAAGGATTCAGAACTGCTTTGAGTGAGTTTGTACTTATGCAACTACAACTGGCACCAGTGTTCTTCACATTCTCTTTGGGGACTAAGACGCACTATTATGGAAGGACTTTGCTCCATGGAGGAGCAAAATATAGGCCTACGGGACGTGGATTTGTTGTGTTTCATGCTAAATTTGCTGACAACTATAGGCTTTACTCCCGGAGCCATTTTGTTAAAGGAATTGAGCTCATGATCTTACTCATTGTATATGAAATTTTTGGTCAACCATATAGAAGTCCGGTTGCTTATATCTTGATAACTGTATCAATGTGGTTCATGGTTGGCACGTGGTTATTTGCTCCTTTCCTTTTCAACCCTTCTGGTTTTGAGTGGCAAAAAATTGTTGATGATTGGACTGATTGGAACAAATGGATAAGTAATAGAGGGGGAATTGGTGTTCCACCAGAAAAGAGTTGGGAGTCTTGGTGGGAGGAGGAACAAGAGCATCTTCACCATTCTGGCATTCGGGGCATTGTTGTTGAGATTCTGTTATCCTTGCGGTTTTTCATATATCAATATGGGCTCATTTACCACTTGAAATTCACGAAGCACCACAAAAGTTTTCTGGTATATGGGCTATCATGGTTGGTGATTGTAGTCGTATTGTTTGTGATGAAGACTGTTTCTGTTGGACGCAGAAGGTTCAGTGCTGATTTTCAGCTTGTGTTTCGGTTGATCAAGGGTCTGATTTTCTTGACATTTGTTGCCATACTGGTGACGCTAATTGCATTACCGAAGATGACATTGCAGGATATCATCGTTTGCATTCTTGCTTTCATGCCAACAGGATGGGGATTACTTCTGATTGCTCAGGCCCTCAGACCAGTCGTTAAAAGATTAGGATTTTGGAGCTCTGTGAGGACACTCGCTCGTGGTTATGAAATAGTGATGGGTTTGCTGCTGTTTACCCCTGTGGCTTTTCTTGCCTGGTTCCCATTTGTCTCAGAATTCCAAACCCGAATGTTATTCAATCAAGCGTTCAGTAGAGGTCTGCAGATCTCACGTATTCTTGGTGGCCATCGTAAAGATCGCGCATCCCGCAACAAGGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40470.p1 GENE.R_Transcript_40470~~R_Transcript_40470.p1 ORF type:complete len:1939 (+),score=314.33,Glucan_synthase|PF02364.11|1.3e-27,Glucan_synthase|PF02364.11|7.9e-221,FKS1_dom1|PF14288.2|1.2e-38,Vta1|PF04652.12|2.9e-20 R_Transcript_40470:798-6614(+)
MASSPRGGGSDQPPARRLMRTQTAGNLGETAFDSEIVPSSLVEIAPILRVANEVEKHNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALLQRLERENDPTLMGRVKKSDAREMQSFDQHYHKKYIQALQHAADNADRAQLTKAYQTANVLFEVLKAVNLTQSMEVDREIMETHNKVAEKTEIYVPYNILPLDPDSANQPIMRFPEIQAAVLAVRSTRGLPWPKGYKKKPDEDILDWLQAMFGFQKDNVSNQREHLILLLANVHIRQFPKPDQQPKLDERALTEVMKKLFKSYKRWCKYLDRKSSLWLPTIQQEVQQRKLLYMGLYLLIWGEAANLRFMPECLCYIYHHMAFELYGMLAGSVSQMTGENVKPAYGGEEEAFLRKVVTPIYNVIAKEAERSKKGKSKHSRWRNYDDLNEYFWSVDCFRLGWPMRADADFYCLPPEDFRRDRNGESKPAGGDRWVGKVNFVEIRSFWHIFRSFDRMWSFFILALQAMIIVAWNGSGDPSAIFETNVFKKVLSVFITASILKLGQSALDVVLSWKARRSMSFHVKLRYILKVVSAAAWVVILPVTYAYSWENPPGFAQTIKTWFGSNANSPSLFFLAIVLYLSPNMLSAVLFLFPFIRRYLERSDYKIVMLMMWWSQPRLYVGRGMHESAFSLFKYTMFWVLLLVTKLAFSYYIEIKPLVAPTKDIMAIRIIDFKWHEFFPQARNNIGAVIALWAPIILVYFMDTQIWYAIFSTLFGGIYGAFRRLGEIRTLGMLRSRFESLPGAFNASLVPVDKSGHKKKGLKATFSRRFPNIPSNKEKEAARFAQLWNKIIASFREEDLISNREMDLLLVPYWADRDLDLIQWPPFLLASKIPIALDMAKDSTGKDKELIKRIEADQYMSCAVRECYASFKSIIKFMVQGDNEINVIDKIFEEVELHIQHGDLVTEYKMSALPSLYSHFVKLMNCLLSNKPEDRDQVVIYFQDMLEVVTRDIMEDTSVLESAHGGLTHEGIDSQLFAAKEAIKFPIEPVTEAWKEKIKRLYLLLTVKESAMDVPSNLDARRRLSFFCNSLFMEMPPAPKVRNMLSFSVLTPYYTEEVLFSLIDLESQNEDGVSILFYLQKIFPDDWENFLQRIGRKSEEDLREEDMEELRLWASYRGQTLTRTVRGMMYYRKALELQAFLDMAEDDVLMEGYKAIELNTEENSKGERSLCQAVADMKFTYVVSCQQYGIHKRAGNQRAQDILRLMTTYPSLRVAYVDEVEEPSKDRTRKIEKVYYSALVKAALPKSSGSKEPEQSLDQVIYRIKLPGQPILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEALKMRNLLQEFLTKHGGVRHPTILGLREHIFTGSVSSLAWFMSNQETSFVTIGQRLLANPLKVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNSTLRGGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDVYRLGHRFDFFRMLSCYFTTIGFYFSTLITVLTVYIFLYGRLYLVLSGLEQGLNSQRRFRNNKPLQVALASQSFVQIGFLMALPMLMEIGLEKGFRTALSEFVLMQLQLAPVFFTFSLGTKTHYYGRTLLHGGAKYRPTGRGFVVFHAKFADNYRLYSRSHFVKGIELMILLIVYEIFGQPYRSPVAYILITVSMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWNKWISNRGGIGVPPEKSWESWWEEEQEHLHHSGIRGIVVEILLSLRFFIYQYGLIYHLKFTKHHKSFLVYGLSWLVIVVVLFVMKTVSVGRRRFSADFQLVFRLIKGLIFLTFVAILVTLIALPKMTLQDIIVCILAFMPTGWGLLLIAQALRPVVKRLGFWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHRKDRASRNKD*

Click here to download the sequence:
Link to NCBI Protein BLAST