Transcript Information: R_Transcript_40487.p1


Annotated TAIR IDAT4G18950.1
Annotated Gene NameIntegrin-linked protein kinase family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10375685-10378129 | Forward length=459
E-Value4.2E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.881701675483
Replicate 25.9831146305018
Replicate 38.3407118423985
Condition 2: 8 Hour
Replicate 19.9494015880627
Replicate 28.5549547941211
Replicate 314.559603241682
Condition 3: 24 Hour
Replicate 110.661145308907
Replicate 26.6922289509667
Replicate 38.9514359537443


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40487.p1 GENE.R_Transcript_40487~~R_Transcript_40487.p1 ORF type:5prime_partial len:379 (+),score=69.49,Pkinase_Tyr|PF07714.13|4.2e-23,Pkinase|PF00069.21|5.4e-19,Ank_2|PF12796.3|1.2e-14,Ank_2|PF12796.3|19,Ank_4|PF13637.2|4.5e-07,Ank_4|PF13637.2|0.001,Ank_4|PF13637.2|13,Ank_4|PF13637.2|7.3e+03,Ank|PF00023.26|0.21,Ank|PF00023.26|0.0019,Ank|PF00023.26|15,Ank|PF00023.26|1e+03,Ank_5|PF13857.2|0.028,Ank_5|PF13857.2|0.0018,Ank_5|PF13857.2|0.86,Ank_5|PF13857.2|1.5e+03,Ank_3|PF13606.2|1.2,Ank_3|PF13606.2|0.042,Ank_3|PF13606.2|2.7,Ank_3|PF13606.2|9.6e+02 R_Transcript_40487:2-1138(+)
TCACTAACCTACACCGTCAACTGCTTTTCCACCTCCACTCGCTCACCCCGCACGTGCCTCCCACGCTCCCTTCGTCAACTTTCAACCCAAAACGCGTACATAGGACTCCAAAATCCCCCCTCTCCAAATCCACCCCCTTCTCTCTCTCACTCCACTTTCTCTCTCCAAAAACCCCCCTCGCCGGCCATGGACACTCCGTCATCGGTGAGGTTCACCCTCGGCCGGCAATCCTCGTACGCCCGCCTCGACAACCTTGTCCCTAATGACGACAACGACAACCACCTCAATCGTCAGCAATTAGGGTTTATAGAGCTCACCGACGGATCATCGGACGGAGGAGCTGTCGAAGAGGAGGAGAGAGAAAGTAGTAGCATTGGCGGCGATGATGATGAGCTGGATATTCCTGTGAGCGTGAAATTGATGTATGCTGCTCATGAAGGGGACTTGGATGGAATTAAAGAGTTGATTGATTCTGGTGCTAATGTTAATTTTCGTGATATTGATAATCGTACTCCTTTACATGTTGCTGCTTGTCAAGGCTATGTTAATGTTGTTGGGTTTTTGGTTGATTCGGGCGCTGAGGTTGAGCCGAAGGACCGCTGGGGCAGTACGCCACTTGCAGATGCCATATACTATAAAAACCATGAGGTGGTGAAACTTTTGGAGGATCATGGTGCAAAGCCTCCGATGGCTCCCATGCATGTCAAAAATTCCCGTGATGTTCCAGAATATGAGATTGATCCACATGAGATTGATTTTAGCGACAGTGTCCATATCACAAAGGGAACTTTTCTCCGGGCATCATGGAGAGGAATAGAAGTTGCTGTCAAAAAGCTAGGAGATGAAGTTTTTACTGATGAAGAAAAAGTGAGAGCTTTCAGGGATGAGCTTGCTTTGCTTCAGAGGGTACGCCATCCCAATGTAGTTCAATTCTTGGGTGCTGTGACTCAAAGTACACCCATGATGATTGTTACGGAGTTTCTATCCAAGGGTGATCTTTGTGAGTATCTGCTAAACAAAGGTGGACTAACGCCTAGAACAGCAGTGAGATATGCTCTCGACATTGCAAGGGGTGTGAGCTACTTGCATGAGATCAAACCAGATCCAATAATTCACAGGGACCTTGAACCTTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40487.p1 GENE.R_Transcript_40487~~R_Transcript_40487.p1 ORF type:5prime_partial len:379 (+),score=69.49,Pkinase_Tyr|PF07714.13|4.2e-23,Pkinase|PF00069.21|5.4e-19,Ank_2|PF12796.3|1.2e-14,Ank_2|PF12796.3|19,Ank_4|PF13637.2|4.5e-07,Ank_4|PF13637.2|0.001,Ank_4|PF13637.2|13,Ank_4|PF13637.2|7.3e+03,Ank|PF00023.26|0.21,Ank|PF00023.26|0.0019,Ank|PF00023.26|15,Ank|PF00023.26|1e+03,Ank_5|PF13857.2|0.028,Ank_5|PF13857.2|0.0018,Ank_5|PF13857.2|0.86,Ank_5|PF13857.2|1.5e+03,Ank_3|PF13606.2|1.2,Ank_3|PF13606.2|0.042,Ank_3|PF13606.2|2.7,Ank_3|PF13606.2|9.6e+02 R_Transcript_40487:2-1138(+)
SLTYTVNCFSTSTRSPRTCLPRSLRQLSTQNAYIGLQNPPSPNPPPSLSHSTFSLQKPPSPAMDTPSSVRFTLGRQSSYARLDNLVPNDDNDNHLNRQQLGFIELTDGSSDGGAVEEEERESSSIGGDDDELDIPVSVKLMYAAHEGDLDGIKELIDSGANVNFRDIDNRTPLHVAACQGYVNVVGFLVDSGAEVEPKDRWGSTPLADAIYYKNHEVVKLLEDHGAKPPMAPMHVKNSRDVPEYEIDPHEIDFSDSVHITKGTFLRASWRGIEVAVKKLGDEVFTDEEKVRAFRDELALLQRVRHPNVVQFLGAVTQSTPMMIVTEFLSKGDLCEYLLNKGGLTPRTAVRYALDIARGVSYLHEIKPDPIIHRDLEPS*

Click here to download the sequence:
Link to NCBI Protein BLAST