Transcript Information: R_Transcript_40488.p1


Annotated TAIR IDAT4G18950.1
Annotated Gene NameIntegrin-linked protein kinase family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10375685-10378129 | Forward length=459
E-Value3.4E-196
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 158.230913480543
Replicate 237.161930265803
Replicate 347.307392861619
Condition 2: 8 Hour
Replicate 143.249489716602
Replicate 258.859350208773
Replicate 361.985119600416
Condition 3: 24 Hour
Replicate 146.497877682198
Replicate 235.440243905692
Replicate 348.414651128083


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40488.p1 GENE.R_Transcript_40488~~R_Transcript_40488.p1 ORF type:complete len:552 (+),score=108.32,Pkinase_Tyr|PF07714.13|1.7e-52,Pkinase|PF00069.21|2.8e-48,Ank_2|PF12796.3|2.2e-14,Ank_2|PF12796.3|18,Ank|PF00023.26|0.33,Ank|PF00023.26|0.003,Ank|PF00023.26|24,Ank|PF00023.26|1.8e+03,Ank_3|PF13606.2|2,Ank_3|PF13606.2|0.068,Ank_3|PF13606.2|4.3,Ank_3|PF13606.2|4.5e+02,Ank_5|PF13857.2|0.045,Ank_5|PF13857.2|0.0014,Ank_5|PF13857.2|1.6,Ank_5|PF13857.2|2.4e+03,Ank_4|PF13637.2|7.6e-07,Ank_4|PF13637.2|4.1,Ank_4|PF13637.2|21,Ank_4|PF13637.2|6.5e+03 R_Transcript_40488:188-1657(+)
ATGGACACTCCGTCATCGGTGAGGTTCACCCTCGGCCGGCAATCCTCGTACGCCCGCCTCGACAACCTTGTCCCTAATGACGACAACGACAACCACCTCAATCGTCAGCAATTAGGGTTTATAGAGCTCACCGACGGATCATCGGACGGAGGAGCTGTCGAAGAGGAGGAGAGAGAAAGTAGTAGCATTGGCGGCGATGATGATGAGCTGGATATTCCTGTGAGCGTGAAATTGATGTATGCTGCTCATGAAGGGGACTTGGATGGAATTAAAGAGTTGATTGATTCTGGTGCTAATGTTAATTTTCGTGATATTGATAATCGTACTCCTTTACATGTTGCTGCTTGTCAAGGCTATGTTAATGTTGTTGGGTTTTTGGTTGATTCGGGCGCTGAGGTTGAGCCGAAGGACCGCTGGGGCAGTACGCCACTTGCAGATGCCATATACTATAAAAACCATGAGGTGGTGAAACTTTTGGAGGATCATGGTGCAAAGCCTCCGATGGCTCCCATGCATGTCAAAAATTCCCGTGATGTTCCAGAATATGAGATTGATCCACATGAGATTGATTTTAGCGACAGTGTCCATATCACAAAGGGAACTTTTCTCCGGGCATCATGGAGAGGAATAGAAGTTGCTGTCAAAAAGCTAGGAGATGAAGTTTTTACTGATGAAGAAAAAGTGAGAGCTTTCAGGGATGAGCTTGCTTTGCTTCAGAGGGTACGCCATCCCAATGTAGTTCAATTCTTGGGTGCTGTGACTCAAAGTACACCCATGATGATTGTTATAGAGTTTCTATCCAAGGGTGATCTTTGTGAGTATCTGCTAAACAAAGGTGGACTAAAGCCTAGAACTGCAGTGAGATATGCTCTCGACATTGCAAGGGGTGTGAGCTACTTGCATGAGATCAAACCAGATCCAATAATTCACAGGGACCTTGAACCTTCAAATATATTGCGGGATGATTCTGGACACCTTAAAGTAGCCGATTTTGGGGTTAGCGAGCTGCTGAAAGTTGCCAAAGGAGTTACTGAAGATCGACCTCAAGTCTCTGCTGACTCTTCATGCCGGTATATGGCACCTGAGCTTTACAGAAATGAAGATTATGATACCAAAGTTGATGTATTTTCATTTGCTTTAATTCTGCAAGAGATGATTGAGGGATCTCCACCATTTTCGTCAATGGAAGAGAAGGATGTTCAAAGAGCATATGCTAAGAATGAGCGTCCACCTTTCAAAGCTTCAGCAAAATTCTATGCGCATGGTTTGAGAGAATTAATTGAAGAATGCTGGAATGAACATCCAGCAAAGAGACCAACATTCAGACAGATAATTGCGAAGTTAGATCACATATACAGCCGTATTGGTCGGAAGAAGCGTTGGATAAAGGTTAGGCCACTCAAATGTTTTCAAAGAAATGAATCTAGCCTTGGCAGCCATGGCAGTTCATCTTATGCTCGAGGCATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40488.p1 GENE.R_Transcript_40488~~R_Transcript_40488.p1 ORF type:complete len:552 (+),score=108.32,Pkinase_Tyr|PF07714.13|1.7e-52,Pkinase|PF00069.21|2.8e-48,Ank_2|PF12796.3|2.2e-14,Ank_2|PF12796.3|18,Ank|PF00023.26|0.33,Ank|PF00023.26|0.003,Ank|PF00023.26|24,Ank|PF00023.26|1.8e+03,Ank_3|PF13606.2|2,Ank_3|PF13606.2|0.068,Ank_3|PF13606.2|4.3,Ank_3|PF13606.2|4.5e+02,Ank_5|PF13857.2|0.045,Ank_5|PF13857.2|0.0014,Ank_5|PF13857.2|1.6,Ank_5|PF13857.2|2.4e+03,Ank_4|PF13637.2|7.6e-07,Ank_4|PF13637.2|4.1,Ank_4|PF13637.2|21,Ank_4|PF13637.2|6.5e+03 R_Transcript_40488:188-1657(+)
MDTPSSVRFTLGRQSSYARLDNLVPNDDNDNHLNRQQLGFIELTDGSSDGGAVEEEERESSSIGGDDDELDIPVSVKLMYAAHEGDLDGIKELIDSGANVNFRDIDNRTPLHVAACQGYVNVVGFLVDSGAEVEPKDRWGSTPLADAIYYKNHEVVKLLEDHGAKPPMAPMHVKNSRDVPEYEIDPHEIDFSDSVHITKGTFLRASWRGIEVAVKKLGDEVFTDEEKVRAFRDELALLQRVRHPNVVQFLGAVTQSTPMMIVIEFLSKGDLCEYLLNKGGLKPRTAVRYALDIARGVSYLHEIKPDPIIHRDLEPSNILRDDSGHLKVADFGVSELLKVAKGVTEDRPQVSADSSCRYMAPELYRNEDYDTKVDVFSFALILQEMIEGSPPFSSMEEKDVQRAYAKNERPPFKASAKFYAHGLRELIEECWNEHPAKRPTFRQIIAKLDHIYSRIGRKKRWIKVRPLKCFQRNESSLGSHGSSSYARGI*

Click here to download the sequence:
Link to NCBI Protein BLAST