Transcript Information: R_Transcript_405259.p1


Annotated TAIR IDAT2G21090.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:9045695-9047488 | Reverse length=597
E-Value9E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.20824306905593
Condition 2: 8 Hour
Replicate 10.11129938612384
Replicate 20
Replicate 30.082507321001759
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.19897913351725


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_405259.p1 GENE.R_Transcript_405259~~R_Transcript_405259.p1 ORF type:3prime_partial len:220 (-),score=26.51,PPR_2|PF13041.2|3.8,PPR_2|PF13041.2|5.7e-06,PPR_2|PF13041.2|2.9e-08,PPR_2|PF13041.2|1.3e+03,PPR_2|PF13041.2|0.00026,PPR|PF01535.16|5.2,PPR|PF01535.16|0.00012,PPR|PF01535.16|8.9,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|0.00016,PPR_1|PF12854.3|7.9,PPR_1|PF12854.3|0.028,PPR_1|PF12854.3|2.4e+02,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|0.57,PPR_3|PF13812.2|3.7e+02,PPR_3|PF13812.2|0.05,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|0.082 R_Transcript_405259:3-659(-)
ATGTCCAACATTTTACCTAGCGTATATGACCTGATAATTTGCCGCCAATTCTGTACACTTCAAACTGCTACTTTGAACCAGATGATGAAAATTTCCCTTCAGAAGGGCAAACTTGATGATGCTGTCAACTTACTTCAGCGAAATCCCATGTCTAGAAACGTTGTATCGTGGAATATAGCGCTATCTGGGTGTATTAAAGACAGCGAAATGAAGCTTGCACACCAATTGTTCGATGAAATGCCTGAAAGAGACACTGTCTCTTGGAATACTTGGCTGTCTCTTTTGCACAAGATTAAAGACCCACAAGGAGCTTACAAGTCTTATCTCCATCTACAAAGATCTGGTCCACGACCCAATAATTACACATTTTCAATCATTATCACCTCAATTTTGGGTAGTATTTTCAATGTGCTAATCCCTCAGCTACATGCCCAAGTTGTTACTTTGGGTTATAATTCCAGTGAGTTTGTGGGCACAGCACTAATGAGAGGGTATACCAATTTGGGGGACCATTCTGCTTTAGGTTGTGTATTTGAGGATGTATTAGCGAAGCATGTCAGTTTGTGGAATGCATTGATTTTGGGTTATATGGATTTGGGTTTAGCCCAAGAGGCTCAGAGAACATTCAACAAGATGCCCGAGAAGAATGTGGTTTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_405259.p1 GENE.R_Transcript_405259~~R_Transcript_405259.p1 ORF type:3prime_partial len:220 (-),score=26.51,PPR_2|PF13041.2|3.8,PPR_2|PF13041.2|5.7e-06,PPR_2|PF13041.2|2.9e-08,PPR_2|PF13041.2|1.3e+03,PPR_2|PF13041.2|0.00026,PPR|PF01535.16|5.2,PPR|PF01535.16|0.00012,PPR|PF01535.16|8.9,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|0.00016,PPR_1|PF12854.3|7.9,PPR_1|PF12854.3|0.028,PPR_1|PF12854.3|2.4e+02,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|0.57,PPR_3|PF13812.2|3.7e+02,PPR_3|PF13812.2|0.05,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|0.082 R_Transcript_405259:3-659(-)
MSNILPSVYDLIICRQFCTLQTATLNQMMKISLQKGKLDDAVNLLQRNPMSRNVVSWNIALSGCIKDSEMKLAHQLFDEMPERDTVSWNTWLSLLHKIKDPQGAYKSYLHLQRSGPRPNNYTFSIIITSILGSIFNVLIPQLHAQVVTLGYNSSEFVGTALMRGYTNLGDHSALGCVFEDVLAKHVSLWNALILGYMDLGLAQEAQRTFNKMPEKNVVS

Click here to download the sequence:
Link to NCBI Protein BLAST