Transcript Information: R_Transcript_405263.p1


Annotated TAIR IDAT1G15820.1
Annotated Gene Namelight harvesting complex photosystem II subunit 6
Annotated Gene Symbol(s)LHCB6, CP24
Annotation TypeOrtholog
Chromosome Positionchr1:5446685-5447676 | Reverse length=258
E-Value1.6E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.25450061110664
Replicate 30.55531485081582
Condition 2: 8 Hour
Replicate 10.14839918149846
Replicate 20.13552049600718
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_405263.p1 GENE.R_Transcript_405263~~R_Transcript_405263.p1 ORF type:internal len:165 (+),score=57.10,Chloroa_b-bind|PF00504.17|3.2e-28 R_Transcript_405263:3-494(+)
GCTGCAACATCTGGTGCTGTGTTAAATGGGTTGGGATCTTCCTTCTTGAGTGGAGGAAACAGGAGCCAAACCCTTCTGGCCTCTGCTATTGGAGGCAAAGTTGGTGCTGCTGTTACTGTTAATCCCAGAAGACTCATTGTGGTAGCTGCTGCTGCACCAAAGAAGTCATGGCTCCCTGGTGTTAGAGGTGGTGGCAATCTCGTCGACCCAGAATGGCTTGATGGATCGCTACCAGGTGACTATGGTTTTGATCCACTAGGCCTTGGGAAGGACCCAGCATTCCTCAAATGGTACAGAGAAGCTGAGCTCATTCATGGGAGGTGGGCAATGGCTGCAGTTCTAGGAATCTTTGTGGGGCAGGCATGGAGTGGAGTGCCATGGTTTGAGGCTGGAGCTGACCCAAATGCAATTGCTCCTTTCTCCTTTGGTACTCTTCTGGGAACCCAGTTGATTCTCATGGGGTGGGTTGAAAGCAAGAGATGGGTGGACTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_405263.p1 GENE.R_Transcript_405263~~R_Transcript_405263.p1 ORF type:internal len:165 (+),score=57.10,Chloroa_b-bind|PF00504.17|3.2e-28 R_Transcript_405263:3-494(+)
AATSGAVLNGLGSSFLSGGNRSQTLLASAIGGKVGAAVTVNPRRLIVVAAAAPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGADPNAIAPFSFGTLLGTQLILMGWVESKRWVDF

Click here to download the sequence:
Link to NCBI Protein BLAST