Transcript Information: R_Transcript_405392.p1


Annotated TAIR IDAT5G62140.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24954563-24955376 | Reverse length=241
E-Value8E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41017889785885
Replicate 20.11795674391179
Replicate 30.12868953705704
Condition 2: 8 Hour
Replicate 10
Replicate 20.25124586338411
Replicate 30
Condition 3: 24 Hour
Replicate 10.12897644509946
Replicate 20.24781189764694
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_405392.p1 GENE.R_Transcript_405392~~R_Transcript_405392.p1 ORF type:3prime_partial len:178 (+),score=22.91 R_Transcript_405392:22-552(+)
ATGGCATCTCTGTTCCCCAAAGTTCCTCAAATATACAGCCAAGCAATCAGCCCAAATACCAAAATCAGCATTCCTAGTCCTACAATTAAAAGTTGTTCAGTTTGCAAAAATGTAATTAGGGTGAAGACATTGGAGGGGTCCAAACTACGGATATCTCATTGGAACTTTGATTACAATGCAAGTGGTGGGAGAGGAACTGGGAAGAGATCGTCATCAATGGAATTCATAAACAATGCTGGTGGTCATGATCATAACCAGTTGATGGTCACGAACTCGCCGGTGATATACGAGGTGGATATGAAGACGGTTCATATCCCGCCGGTGAATACCTTCACCACCAAGATTGACGGGTGGGCCCCATTCCCGCCCCTTGTCAATGTTGACATTGTCCCCGAATTCCTTCGAGGCCTTGTCTATCAAGACTCTGGAAAGGTTGAACTTGAATTCAGAGCTATGTTCCAGATATCTATTGGTAACACTTATAAGGCTCCCCCATTGCTGGTGGATACAATACTAACATCTGAACAGTCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_405392.p1 GENE.R_Transcript_405392~~R_Transcript_405392.p1 ORF type:3prime_partial len:178 (+),score=22.91 R_Transcript_405392:22-552(+)
MASLFPKVPQIYSQAISPNTKISIPSPTIKSCSVCKNVIRVKTLEGSKLRISHWNFDYNASGGRGTGKRSSSMEFINNAGGHDHNQLMVTNSPVIYEVDMKTVHIPPVNTFTTKIDGWAPFPPLVNVDIVPEFLRGLVYQDSGKVELEFRAMFQISIGNTYKAPPLLVDTILTSEQS

Click here to download the sequence:
Link to NCBI Protein BLAST