Transcript Information: R_Transcript_405887.p1


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.070203695979688
Replicate 20
Replicate 30.44051418454139
Condition 2: 8 Hour
Replicate 10.1883528072865
Replicate 20.086003391696868
Replicate 30.069813887001488
Condition 3: 24 Hour
Replicate 10
Replicate 20.084827918809913
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_405887.p1 GENE.R_Transcript_405887~~R_Transcript_405887.p1 ORF type:complete len:260 (-),score=37.93,HTH_Tnp_Tc3_2|PF01498.14|3.2e+03,HTH_Tnp_Tc3_2|PF01498.14|1.3e+04,HTH_Tnp_Tc3_2|PF01498.14|1.4e-07 R_Transcript_405887:111-890(-)
ATGGCAGCTAGCTTTTGCCCACCACCCACTGAGATCTCTTTTTCTGAAATTCACCCAGAAGATAGTGAAATACCAACAGCAACAGACGTGGCAGCCAACCAAACACACAATCAAACACACAATCAAACAAAGTATCCCAAATTATCAGATGAAAACAGGTCAAAAATTTTTCAGATTCTGTTGAAGAACTACAATGGTGGAAAACTTCAGTGGGGTCTGAAGTCAAAATTGGCAAAGGAATATAAAGTGACAACAAAAACAGTGAGCAAACTATGGAGCCAGGCAGTGGATCAAATGGAAGCTGGAAAGACGGTAAATGTACAGAGCAAAATGAAGGGCAATGTCGGGCGCAAGAGAATTCAGATAGACTTGCAGACAATGAGTGACATTCCACTACACAGAAGGAAAACAATGAAGGCACTTGGGGCTGCCTTGGGGGTGTCAGCATCCACAGTCCACAGAATGCTCAAAAGGAAAAACATAAAGAGACACTCAAGTGCAATTAAACCACATCTATCAGAGGCAGGGAAGATAAAAAGGTTAGAATATTGCTTAAATCATCTTGAGCCTTTTTCTCTACCACATGAATCTACTTTTAATGACATGTATTTACACATTAATATTGATGAAAAATGGTTCAATATGACAAAAGAAACTGAAACTTTCTATACACACACTGAAGAATCAGACCCATATAGAACATGTCAGTCTGAATCAAACTTACCAAAATCAATGTTTCTAGGTGTAACACCCTGGAAATCCTTAATAATATTTTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_405887.p1 GENE.R_Transcript_405887~~R_Transcript_405887.p1 ORF type:complete len:260 (-),score=37.93,HTH_Tnp_Tc3_2|PF01498.14|3.2e+03,HTH_Tnp_Tc3_2|PF01498.14|1.3e+04,HTH_Tnp_Tc3_2|PF01498.14|1.4e-07 R_Transcript_405887:111-890(-)
MAASFCPPPTEISFSEIHPEDSEIPTATDVAANQTHNQTHNQTKYPKLSDENRSKIFQILLKNYNGGKLQWGLKSKLAKEYKVTTKTVSKLWSQAVDQMEAGKTVNVQSKMKGNVGRKRIQIDLQTMSDIPLHRRKTMKALGAALGVSASTVHRMLKRKNIKRHSSAIKPHLSEAGKIKRLEYCLNHLEPFSLPHESTFNDMYLHINIDEKWFNMTKETETFYTHTEESDPYRTCQSESNLPKSMFLGVTPWKSLIIFL*

Click here to download the sequence:
Link to NCBI Protein BLAST