Transcript Information: R_Transcript_405950.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13828000723272
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.1375122016696
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.33163188919541


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_405950.p1 GENE.R_Transcript_405950~~R_Transcript_405950.p1 ORF type:complete len:132 (+),score=16.45,gag_pre-integrs|PF13976.2|1.5e-05 R_Transcript_405950:57-452(+)
ATGAAGAGGCCCTTGGTTCTTGGTAAGCAGCAGGGGGGTCTATATCTTCTACATCCCACAGAAGCATCCACATCTTCTAGCAGCTCCATATCTTCATTAGTTTCTCATTCAGATTGTAATAATTCTGGCAGTAGCAATTCTATTGTAAATAAAGTTTCTGATGGATGCTTATTGTGGCATTCTAGACTTGGGAATTTGCCTCTGTATAAAATGAAACAGTTATCCATCACTCCTATTGATCAATCTTCTATTTCTCATTTTCATTGTGAAATATGTCACAGAGCTAGACAGCATAAACTACCCTTTCCTCACAGTCAAATTAAAACTTCAAAACCATTTGAGTTGATTCATGTTAATCTTTGGGGGCCTTATCATCAACCAACACATGATGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_405950.p1 GENE.R_Transcript_405950~~R_Transcript_405950.p1 ORF type:complete len:132 (+),score=16.45,gag_pre-integrs|PF13976.2|1.5e-05 R_Transcript_405950:57-452(+)
MKRPLVLGKQQGGLYLLHPTEASTSSSSSISSLVSHSDCNNSGSSNSIVNKVSDGCLLWHSRLGNLPLYKMKQLSITPIDQSSISHFHCEICHRARQHKLPFPHSQIKTSKPFELIHVNLWGPYHQPTHDG*

Click here to download the sequence:
Link to NCBI Protein BLAST