Transcript Information: R_Transcript_40617.p1


Annotated TAIR IDAT4G00150.1
Annotated Gene NameGRAS family transcription factor
Annotated Gene Symbol(s)HAM3, ATHAM3, LOM3
Annotation TypeOrtholog
Chromosome Positionchr4:57429-59105 | Reverse length=558
E-Value1.5E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 149.788593026721
Replicate 234.821329211537
Replicate 341.215996167725
Condition 2: 8 Hour
Replicate 135.981576190083
Replicate 239.367749720397
Replicate 342.843766382157
Condition 3: 24 Hour
Replicate 149.903590358812
Replicate 242.790308622212
Replicate 343.210233900659


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40617.p1 GENE.R_Transcript_40617~~R_Transcript_40617.p1 ORF type:complete len:852 (+),score=218.71,GRAS|PF03514.10|3.8e-87 R_Transcript_40617:441-2996(+)
ATGATGCGAGCTATGCCCTACAATTTGCAAGGGAAGGGCGTGGTAGAGGTATCAGGTATTAGTATTTCACAAATCTCTTCCTCTGCTCCAAAGTGGAAGAGTTTAGACAAATTTCAGCAACAAGAAACTTCAATAGAAACGGGTACGGGTACAGTAGCAGCAGTAACAACAACTACAACAGCAACAGCTGAAGAGAAAGAGTTTGAGCTTCATAGTACAAAAAGAGCAAGAGCAACAAGTTCAATAGACAGTGAACCCACATCTACTCTGGATACTACTAGGCGAAGCCCAAGCCCACCCACCTCCACATCCACCCTTTCCTCATCCTTTACCGGCGGCGGAGGTGGCAAGAACTCGGCTGCTGGTGGTGGTGGTGGTAGCAGCACTGACAACACTGCCGGTGTGGCGGACCCGGCATGTGCCCGCCAAGAGGATTGGGCCTCAGACCTCCATAACGGATCCGATAATGTCAAGGCTGATGGTGGTAGCACCAACTCCGGTGCACCACCAGAGAGATGCACCGGAGTTGGACTTTCCGGTGGTAGTGGTAATGGTGGGGGGCTTGGAATGGAGGAGTGGGATAGTATGTTTCCAAATGGGGATGGGGCTTTGTTGCCTTGGATAATGGGGGAAGCTGATGATATGGGTTTGGGTTTGAAGCATCTTTTGCAAACTGGTAATCCTGTTGTTGAGTATGAAGGCAATGCTGGCCTTGGTGTTGTTGATCAGGGGTCTGGTTTGGAGAGCCTTTCTCCTTCTCAACAACCACCTCCTTCTATTGTTGGTAGTGAAGGTCATCTGGGTTTGATTCCAACCAGTGGGTCTAATCTGGGATTTAGTACTACTGCTGGGTTTGTTGGGAGTAATGGTAAGATGGGTTCGATTTCGCCTAATTGTTCATCTGGGGATTTGGATTGTAAGGTTACTAGTAATGGGTTGAATCCTAATTTGCTTGGTGGTGGTGGTTCTGTTCCTGTTTCTCTGCAAGGTGGTGGTGTTAGTGTTGGTGGTGGGTTGGTTTTCCCACAACCAGTGTCTTTTGAAGGGGGTGATGAAAAGCCTCAGATATTCAACCCACAATTGGTGATGAACCCTCAACAGGCACAGAGCATTGCAAACCCTAGTTTTTTGATGCCTCAATTGGGGTTTTGTCAGTTGGAACAACACGGGTTTCAGCCACAGTCGAAGCGCCACAACCCAGGTGTTGTTCTGGACCCTAATCTTGTCCAAGTAGCTACCAAGAACCCATTTCTCGATCAGAGTCATGAGCTTTTGTTCAGGAAGCAGCAACAGCAACAGCAACAGCAGATGAGTTTACAACAGCAGTTGCCAATTGGTTTGGCTCATCAATTGCTTCCTCAGCATATCCAACAACAGCATAAGCCAATGATGGTGCCCAAGCAGCATTACCCAATGGCTGTCCAACAACAACAGCAGTTGCAAGAACAGGCTGTGAAAGACCAGCTGTACAAGGCGGCAGACCTGATTCAAACTGGGAATTTCCAACTCGCGCAAGAGATATTGGCGCGGCTCAATCACCAGCTCTCCCTTCCTGCAAAGCCCCTCCTAAGGGCGGCTTTGTACGTCAAGGAGGCCCTCCAAATGCTCCTTCTCATGGGCAACCCAGTTGCTGCACCGGCACCGCCTAAGTCCTCCCTCCTTACCCCTTTTGATGTTGTTCATAAGATGAATGCTTACAAACTCTTCTCTGAGGTCTCTCCTATTACTCAATTTGTCAATTTCACTTGCACCCAAGCTATTCTTGAGGCCCTTGATGATTCTGATGCTGTTCATATTCTTGACTTTGACCTTGGTTGTGGTGCTCAATGGGCTTCTTTACTTCAGGAGCTTCCTTTGAGGAAAAGGGGTGCTCCTTCCCTTAAGATTACTGCCTTTGCTCCCCTCTCAACTACCCACCCCTTTGAACTTGGCCTTGTTCGGGATAATCTTGTTCAATTTGCTAATGACATTGGTGTTGCTTTTGACCTTAATGTGGTGAACTTGGATTTATTTGATCCTTCTTCATCTTCAATGCCTAGTCTTAGGACCTCCGAGGAGGAATCGATTGCTGTCAATATCCCTGTCTGGGCATCCTCAAATCGTCCATCAGTTCTCCCCTCCATCCTTCGGTTCATTAAACAACGGTCTCCCAAAATCGTGGTCTCCATGGATAGAGGATTCGATCGCTGTGATGTTTCATTCCCACAACATGTGCTCCATACCTTGGAGTCCTGTACTAATTTCTTGGAGTCGCTTGATGGTCTCCATGTAGCTTCAGATATCGTGAGCAAGGTTGAGAAGTTTATTATCCAGCCCAAGATTGAAAACACTGTGATGGGGCGCGTCCATGCCCCTGACAAGATGCCCCATTGGAAGAATCTGTTTACTTCAGCTGGATTCTTGCCCTTGCAATTCAGTAATTTCACAGAAACGCAGGCAGATTATGCGGTGAAGAGAACTCCGGGGAGGGGATTCCATGTAGAGAAGCGCCAGGCATCTCTTGTGCTTAGTTGGCAGAGGCGCGAGCTTGTGGCAGCTTCAGCATGGAGGTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40617.p1 GENE.R_Transcript_40617~~R_Transcript_40617.p1 ORF type:complete len:852 (+),score=218.71,GRAS|PF03514.10|3.8e-87 R_Transcript_40617:441-2996(+)
MMRAMPYNLQGKGVVEVSGISISQISSSAPKWKSLDKFQQQETSIETGTGTVAAVTTTTTATAEEKEFELHSTKRARATSSIDSEPTSTLDTTRRSPSPPTSTSTLSSSFTGGGGGKNSAAGGGGGSSTDNTAGVADPACARQEDWASDLHNGSDNVKADGGSTNSGAPPERCTGVGLSGGSGNGGGLGMEEWDSMFPNGDGALLPWIMGEADDMGLGLKHLLQTGNPVVEYEGNAGLGVVDQGSGLESLSPSQQPPPSIVGSEGHLGLIPTSGSNLGFSTTAGFVGSNGKMGSISPNCSSGDLDCKVTSNGLNPNLLGGGGSVPVSLQGGGVSVGGGLVFPQPVSFEGGDEKPQIFNPQLVMNPQQAQSIANPSFLMPQLGFCQLEQHGFQPQSKRHNPGVVLDPNLVQVATKNPFLDQSHELLFRKQQQQQQQQMSLQQQLPIGLAHQLLPQHIQQQHKPMMVPKQHYPMAVQQQQQLQEQAVKDQLYKAADLIQTGNFQLAQEILARLNHQLSLPAKPLLRAALYVKEALQMLLLMGNPVAAPAPPKSSLLTPFDVVHKMNAYKLFSEVSPITQFVNFTCTQAILEALDDSDAVHILDFDLGCGAQWASLLQELPLRKRGAPSLKITAFAPLSTTHPFELGLVRDNLVQFANDIGVAFDLNVVNLDLFDPSSSSMPSLRTSEEESIAVNIPVWASSNRPSVLPSILRFIKQRSPKIVVSMDRGFDRCDVSFPQHVLHTLESCTNFLESLDGLHVASDIVSKVEKFIIQPKIENTVMGRVHAPDKMPHWKNLFTSAGFLPLQFSNFTETQADYAVKRTPGRGFHVEKRQASLVLSWQRRELVAASAWRC*

Click here to download the sequence:
Link to NCBI Protein BLAST