Transcript Information: R_Transcript_406208.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value3E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13933557980701
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.18691499959729
Replicate 20
Replicate 30.13856191313273
Condition 3: 24 Hour
Replicate 10.1752504368527
Replicate 20
Replicate 30.16708171516716


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_406208.p1 GENE.R_Transcript_406208~~R_Transcript_406208.p1 ORF type:internal len:131 (+),score=4.37,PIF1|PF05970.10|7.2e-14 R_Transcript_406208:2-391(+)
GATGATTGCAATGCTCATCCTGTCGAATTCTTGAACACCCTATGTCCAGGAGGCATGAGCCCACACTGTCTGACGCTCAAACTTAACTGTCCAGTCATATTGCTCCGCAATCTTAACCCCTCTGTTGGTTTATGTAACGGAACAAGACTCATTTGTCGAGACTTTAGACCAAATGTTATTATATGTGAAATCGCGACAGGGTATCATTCTGGTGAACATGTTTTCATTCCAAGAATCAGCCTCAGACCTTCATCTTCTATTACTTATCCCTACAAATTTGAGAGGAGGCAATTTCCAATCAAACTGTGCTTTGCAATGACAATAAACAAAGCTCAAGGCCAGACCCTTACCGATGTTGCTGTCTACCTTAGAAAACAGTGCTTTTCTCAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_406208.p1 GENE.R_Transcript_406208~~R_Transcript_406208.p1 ORF type:internal len:131 (+),score=4.37,PIF1|PF05970.10|7.2e-14 R_Transcript_406208:2-391(+)
DDCNAHPVEFLNTLCPGGMSPHCLTLKLNCPVILLRNLNPSVGLCNGTRLICRDFRPNVIICEIATGYHSGEHVFIPRISLRPSSSITYPYKFERRQFPIKLCFAMTINKAQGQTLTDVAVYLRKQCFSH

Click here to download the sequence:
Link to NCBI Protein BLAST