Transcript Information: R_Transcript_40622.p1


Annotated TAIR IDAT5G47080.1
Annotated Gene Namecasein kinase II beta chain 1
Annotated Gene Symbol(s)CKB1
Annotation TypeOrtholog
Chromosome Positionchr5:19124969-19126397 | Reverse length=287
E-Value4.3E-166
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 169.47693940863
Replicate 249.311733724193
Replicate 360.493145060262
Condition 2: 8 Hour
Replicate 170.267534971848
Replicate 288.656172370334
Replicate 3100.34517138735
Condition 3: 24 Hour
Replicate 167.822536140999
Replicate 262.127489832612
Replicate 367.5898486282


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40622.p1 GENE.R_Transcript_40622~~R_Transcript_40622.p1 ORF type:complete len:284 (+),score=45.72,CK_II_beta|PF01214.14|7.5e-83 R_Transcript_40622:478-1329(+)
ATGTATAAAGATCGAGGATCGAAAGGGGATATGGGGACAGTGGATCGAAAGAGGATCAACGAAGCGTTGGATAAGCACTTAGAGAGATCATCGCCTTCAACTTCGAAAGGATTGAACGGTAAAGAGAAAGATAGGCTTCCGATTATTAGCGGTGGTACTGGTAAACAACCTTCTGGTCAGAGAGATTCTCGTTCTCTTTCTCTCCCTAAGAATCGTTGTTCCGATGAGGAATCAGAAACTGATAGTGAAGAGTCTGATGTCAGTGGGTCTGATGGCGATGATACATCTTGGATCTCATGGTTCTGCAACTTGCGAGGCAATGAGTTCTTCTGCGAAGTTGATGATGACTACATTCAAGATGATTTTAACTTGTGTGGTTTAAGCAGCCAAGTTCCCTATTATGACTATGCCCTGGATTTAATTTTGGATGTGGAATCCTCACATGGTGATATGTTTACGGAGGAACAGAATGAATTAGTTGAATCTGCAGCTGAAATGCTGTATGGTTTAATCCATGCTCGATACATACTGACTAGCAAGGGAATGGCTGCAATGCTTGAGAAGTACAAAAACTACGACTTTGGGAGATGTCCCAGGGTTTATTGCTGTGGACAACCTTGCCTTCCAGTTGGGCAATCTGATATTCCTCGCTCAAGCACAGTGAAGATCTACTGTCCTAAATGTGAAGATATTTACTACCCCCGTTCCAAGTACCAAGGCAACATCGATGGAGCTTATTTTGGGACAACATTTCCTCATCTCTTCTTAATGACATACCCACATCTGAAGCCTCAGAAACCGAGTCAGAGCTACACTCCAAGGGTGTTTGGTTTCAAGATCCACAAGCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40622.p1 GENE.R_Transcript_40622~~R_Transcript_40622.p1 ORF type:complete len:284 (+),score=45.72,CK_II_beta|PF01214.14|7.5e-83 R_Transcript_40622:478-1329(+)
MYKDRGSKGDMGTVDRKRINEALDKHLERSSPSTSKGLNGKEKDRLPIISGGTGKQPSGQRDSRSLSLPKNRCSDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLYGLIHARYILTSKGMAAMLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYPHLKPQKPSQSYTPRVFGFKIHKP*

Click here to download the sequence:
Link to NCBI Protein BLAST