Transcript Information: R_Transcript_40648.p1


Annotated TAIR IDAT5G15400.1
Annotated Gene NameU-box domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4997764-5002907 | Reverse length=1038
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 139.910801164452
Replicate 229.677463088421
Replicate 331.540815613164
Condition 2: 8 Hour
Replicate 129.618478945802
Replicate 235.347393987413
Replicate 343.528958545428
Condition 3: 24 Hour
Replicate 137.593409335366
Replicate 232.128574249254
Replicate 338.366620811744


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40648.p1 GENE.R_Transcript_40648~~R_Transcript_40648.p1 ORF type:complete len:1040 (+),score=215.62,Ufd2P_core|PF10408.5|4.4e-200,U-box|PF04564.11|2.6e+03,U-box|PF04564.11|5.8e-28 R_Transcript_40648:336-3455(+)
ATGGCTACCCAGAAGCCCCAAAGATCACCAGTAGAAATTGAAGACATAATTTTAAGGAAGATATTTCTGGTATCTCTAATTGATTCAATGGAATCCGATTCTCGGGTAGTGTATTTGGAGTTAACAGCAGCTGAAATTCTCAGTGAAGGTAAAGAATTGCTACTTTCTAGGGATTTGATGGAAAGGGTTTTATTTGATAGGTTGTTATCAAATCAGTTTCCTAATGCTGAACCTCCTTTCCGTTATTTAGTTGGTTGTTATAAACGTGCTTATGAAGAAGAAAGGAAGATTAGTAACATGAAAGATAAAATTGTGAGGTCTGAGATGGAATCAGCTGTTCAACAAGCTAAGAAATTGGCTGTTTCTTATTGTAGAATTCATCTGGGTAATCCTGATATGTTCCCTAGTCCTGATAATAATGTTAATAATAATAACCCTCTAGGGAAAAAGGAGCACCCTTTATTACCCTTAATTTATTCTGAGGTTGGAAGCACACTTGTTGGGTTTGAAGGGACTGGGAGTAGTAGCAGTGGTATCACAAGCCCACCTGGGTTTTTGGAGGAGTTCTTTAGGGATGGTGATTTCGATAGTTTGGACCCGATTTTTAAGGGTTTGTATGATAGTTTGAGGGAGAAGGTGTTGAGGGAATCAGCATTGGGGAATTTTCAGCAACCCTTGAGGGCTTTGTTGTACTTGGTGAAGTTCCCGTCCGGGGCAAAATCTTTGGTTACTCATCAGTGGTGGATGACTCCTGGTGAGTATGTCACTGGTCGTGCTATGGAGGTAACGAGCATTTTGGGCCCTTTCTTTCGGATCAGTTCATTGCCTGATAATAGTTTGTTCAAAAGTCAGCCTGATGTTGGTCAACAGTGCTTCTCTGAGGCATCAACTCGTCGTCCAGCGGATCTCCTGTCATCGTTCACCACTATCAAGACTGTAATGAATAACTTATATGATGGTCTCCATGAGGTTGTTCTTGGTCTTCTGAAAAATACAGAGATCCGTGAGAAAGTTCTCGAGTTTTTAGCCACTGTGATTAATAAGAATTCTGCCAGAGCACACTTGCAGGTTGATCCATTGACGTGTGCAAGTTCTGGCATGTTTGTTAACCTCAGTGCTGTTATGCTTAAGCTATCTGAGCCATTTTTAGATGCAAATCTCACCAAAAAAGATAAGATTGATCCTAAATATGTTTTTTACAGCAATCGTCTGGGTTTGAGAGGACTGACAGCACTGCATGCATCATCTGAAGAGGTTTCTGCATACATCTCCAAGCTTAATGCTGGAAAATCAGTCAGCTCTACCTTAAATAATGTTGGAAATAGCCGCTTGTTGACATCTCTAGAAGCCACCGCTTCTGGCAGTAATTCGGGTCCATCACATGGCCAAAATGCGAAATATCCTTTTATCTGTGAATGCTTCTTTATGACAGCAAGAGTTCTTAACTTGGGCTTACTGAAAGCATTTTCTGACTTCAAGCATCTAGTTCAGGATATTTCGAGATGTGAAGATACCCTGTCTACGTTTAAAGATATGCAAGAGCAAGCACCATCACGTCAATTAGAGTTGGATATAGCTCGTCTTGAAAAAGAGATTGAATCATATTCACAGGAAAAGCTATGTTATGAAGCACAAATACTTAGGGATGGAGGGCTTATTCAACAAGCTTTATCATTTTATCGATTAGTGGTTGTATGGCTGGCTGATCTGGTTCATGGTTTCAAAATGCCTTTGCCACCAAATTGCCCTATGGAGTTTGCTTGTATGCCTGAGCATTTTGTTGAGGATGCAATGGAGTTGCTGATATTTGCATCGCGAATTCCAAAAGCATTGGATGGGGTTAAGTTGGATGATTTCATGAACTTCATTATCATGTTTATGGCCAGCCCTGAGTATATAAGAAATCCTTATTTAAGGGCAAAAATGGTGGAAGTACTTAACTGTTGGATGCCACGTAGGAGTGGTTCATCTGCAACAGCTACCCTATTTGAAGGTCACCAAATGTCTTTGGAGTATCTTGTCAGAAATCTTCTAAAGCTATATGTTGATATTGAATTTACAGGCTCGCACACACAGTTTTATGATAAGTTCAATATTCGTCACAATATTGCGGAACTTCTCGAGTACCTGTGGCAGGTTCCTAGTCATCGCAATGTTTGGCGACAGATTGCCAAGGAGGAAGAGAAGGGTGTCTATCTCAATTTCTTGAATTTCCTGATTAATGACAGCATCTATCTCCTTGATGAAAGCCTTAATAAAATTCTTGAACTCAAAGCACTTGAAGCTGAAATGTCGAACACTGTTGAATGGGAGCAAAGGCCCATTCAGGAGAGGCAGGAGAGAACACGGCTTTTCCATTCCCAGGAGAATATAATAAGGATCGATATGAAACTGGCTAATGAAGATGTTAGTATGCTGGCTTTCACTACAGAACAGATCACGTCACCTTTCCTTCTTCCAGAGATGGTTGAAAGAGTTGCCAGCATGCTTAATTACTTTTTGCTACAACTTGTGGGCCCCCAAAGAAAATCTCTAAGCTTAAAGGATCCTGAAAAGTATGAATTTCGTCCGAAACATTTGCTTAAACAGATTGTCAACATATATGTTCATCTGGCAAGAGGAGACAAAGAAAATGTTTTTCCCGCTGCAATCTCAAAGGATGGTCGTTCGTACAATGAACAGTTATTTGGCGCTGCAGCTGATGTTCTAAGAAGAATAGGTGAAGATGGAAGGATTATACAGGAGTTCGTCGAGCTTGGTGTGAAAGCTAAAGCTGCAGCTGCAGAAGCCATGGATGCAGAAAATGCTCTTGGAGATATACCTGATGAATTCTTGGACCCAATTCAGTACACGCTAATGAAGGACCCCGTCATATTGCCTTCTTCAAGAGTCACACTTGACCGTCCTGTCATCTTGAGACATCTTCTGAGTGATAGCACCGATCCTTTCAATCGTTCAAGCCTGACTCCGGGCATGCTGATTCCTGATCATGAGCTGAAGGCAAGAATTGAGGAATTTGTCAGGAACCAAGCGAACAAGAAAGATGATGGTGGTCTACACCTTCATAGCACCAAAGGAACAATCCAGACGCCAACTACTGATATGTCATTGATTGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40648.p1 GENE.R_Transcript_40648~~R_Transcript_40648.p1 ORF type:complete len:1040 (+),score=215.62,Ufd2P_core|PF10408.5|4.4e-200,U-box|PF04564.11|2.6e+03,U-box|PF04564.11|5.8e-28 R_Transcript_40648:336-3455(+)
MATQKPQRSPVEIEDIILRKIFLVSLIDSMESDSRVVYLELTAAEILSEGKELLLSRDLMERVLFDRLLSNQFPNAEPPFRYLVGCYKRAYEEERKISNMKDKIVRSEMESAVQQAKKLAVSYCRIHLGNPDMFPSPDNNVNNNNPLGKKEHPLLPLIYSEVGSTLVGFEGTGSSSSGITSPPGFLEEFFRDGDFDSLDPIFKGLYDSLREKVLRESALGNFQQPLRALLYLVKFPSGAKSLVTHQWWMTPGEYVTGRAMEVTSILGPFFRISSLPDNSLFKSQPDVGQQCFSEASTRRPADLLSSFTTIKTVMNNLYDGLHEVVLGLLKNTEIREKVLEFLATVINKNSARAHLQVDPLTCASSGMFVNLSAVMLKLSEPFLDANLTKKDKIDPKYVFYSNRLGLRGLTALHASSEEVSAYISKLNAGKSVSSTLNNVGNSRLLTSLEATASGSNSGPSHGQNAKYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRCEDTLSTFKDMQEQAPSRQLELDIARLEKEIESYSQEKLCYEAQILRDGGLIQQALSFYRLVVVWLADLVHGFKMPLPPNCPMEFACMPEHFVEDAMELLIFASRIPKALDGVKLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWMPRRSGSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNVWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKALEAEMSNTVEWEQRPIQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTTEQITSPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKHLLKQIVNIYVHLARGDKENVFPAAISKDGRSYNEQLFGAAADVLRRIGEDGRIIQEFVELGVKAKAAAAEAMDAENALGDIPDEFLDPIQYTLMKDPVILPSSRVTLDRPVILRHLLSDSTDPFNRSSLTPGMLIPDHELKARIEEFVRNQANKKDDGGLHLHSTKGTIQTPTTDMSLID*

Click here to download the sequence:
Link to NCBI Protein BLAST