Transcript Information: R_Transcript_4068.p1


Annotated TAIR IDAT5G52820.1
Annotated Gene NameWD-40 repeat family protein / notchless protein, putative
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21401423-21404203 | Forward length=473
E-Value6.8E-299
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.61095819101
Replicate 28.5654363622973
Replicate 313.322328560105
Condition 2: 8 Hour
Replicate 111.679450225883
Replicate 213.472665209752
Replicate 315.835191691844
Condition 3: 24 Hour
Replicate 117.290398748899
Replicate 214.349760491568
Replicate 317.903959273173


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4068.p1 GENE.R_Transcript_4068~~R_Transcript_4068.p1 ORF type:complete len:478 (+),score=96.32,WD40|PF00400.28|1.8e-06,WD40|PF00400.28|4.9e-05,WD40|PF00400.28|0.0093,WD40|PF00400.28|1.1e-05,WD40|PF00400.28|0.29,WD40|PF00400.28|29,WD40|PF00400.28|2.5e-07,WD40|PF00400.28|4.6e-06,WD40|PF00400.28|6.6e-05,NLE|PF08154.8|3.6e-10,eIF2A|PF08662.7|0.0038,eIF2A|PF08662.7|2.1e+03,eIF2A|PF08662.7|4.1,eIF2A|PF08662.7|3.5,Ge1_WD40|PF16529.1|0.0012,Ge1_WD40|PF16529.1|3.5e+02,Ge1_WD40|PF16529.1|0.45,Ge1_WD40|PF16529.1|4.2e+02,PD40|PF07676.8|8.9,PD40|PF07676.8|0.85,PD40|PF07676.8|12,PD40|PF07676.8|6e+02,PD40|PF07676.8|1.1e+02,DUF3312|PF11768.4|0.00043,DUF3312|PF11768.4|1.8 R_Transcript_4068:177-1610(+)
ATGGACAATGACAATGACAACGACAACGGCAACGACAACAGGGTCATGTGTCAATTGGCTGACCCAGAAGGGACGCCTCTTGGTACTACTATGTATCTTCCTCAAAATGTTGGCCCTAAAGAGCTTCTCCAAATTGTCAATAAACTTCTCAACAATGAAGAGAAGCTTCCTTATGCTTTCTATATATCTGACAACGAACTTGTTGTGGAGCTTGGAACTTATCTACAGAAGAATAAAGTTTCTGTGGAGAAGGCAGTTCAAATAGTTTATCAACCACAGGCAATCTTTCGGATTCGCCCTGTTAACCGTTGTTCTGCTACAATAGCTGGTCATACAGAAGCTGTGCTTTCAGTAGCGTTTAGTCCTGATGGCCGACAATTGGCTAGTGGTTCAGGCGACACTAATGTTAGACTGTGGGATATATATACACAGACGCCATTGCACACCTGTACAGGGCACAAAAATTGGGTACTTTGCATTGCATGGTCCCCTGATGGTAAGCATCTAGTCAGTGGAAGTAAGGCAGGAGAACTACAGTGCTGGGATCCTCAAACAGGAAAGCCATCAGGCAATCCACTTGTGGGGCACAAAAAATGGATTACTGGCATATCTTGGGAACCAGTCCATCTCCAAGCTCCATGTCGCCGGTTTGTAAGTTCTAGCAAAGATGGTGATGCTCGTGTTTGGGATGTGGCCCTTAGAAAATGTGTTCTGTGCTTGAGTGGGCACATGCTTGCTGTAACTTGTGTGAAGTGGGGTGGAGAAGGATTGATATACACCGGCTCTCAGGATTGTACAATAAAAGTATGGGAAACAAAGCAAGGGAAATTGATTCGTGAATTGAAGGGCCATGGACATTGGGTCAATTCTTTAGCACTCAGTACTGAGTATGTACTTCGCACTGGAGCTTTTGACCACACGGGGAAACAGTATTCTTCTCCTGAGGAAATGAAGGAGGTTGCTCTGGCTAGATACAACCAAATGAGAGGCAATGCTCCGGAGAGACTGGTTTCAGGTTCCGATGATTTTACCATGTTTCTGTGGGAACCTGATGTAAGCAAGCATCCTAAAACCAGAATGACTGGTCACCAGCAGCTTGTAAATCATGTCTACTTTTCTCCTGATGGTCAATGGGTGGCAAGTGCTTCATTTGATAAATCAGTGAAGTTATGGAATGGTGTTACGGGAAAATTTGTTGCTGCCTTCCGAGGTCATGTTGGGCCTGTCTATCAGATAAGCTGGTCAGCAGATAGTAGGCTTTTGTTGAGTGGGAGCAAGGACTCAACACTCAAGATTTGGGATATCAGGACACAAAAGTTGAAACAAGATCTCCCAGGTCATGCAGATGAGGTTTTTGCTGTTGATTGGAGTCCCGACGGAGAAAAGGTGGCATCTGGTGGCAGGGATAGAGTATTGAAATTGTGGATGGGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4068.p1 GENE.R_Transcript_4068~~R_Transcript_4068.p1 ORF type:complete len:478 (+),score=96.32,WD40|PF00400.28|1.8e-06,WD40|PF00400.28|4.9e-05,WD40|PF00400.28|0.0093,WD40|PF00400.28|1.1e-05,WD40|PF00400.28|0.29,WD40|PF00400.28|29,WD40|PF00400.28|2.5e-07,WD40|PF00400.28|4.6e-06,WD40|PF00400.28|6.6e-05,NLE|PF08154.8|3.6e-10,eIF2A|PF08662.7|0.0038,eIF2A|PF08662.7|2.1e+03,eIF2A|PF08662.7|4.1,eIF2A|PF08662.7|3.5,Ge1_WD40|PF16529.1|0.0012,Ge1_WD40|PF16529.1|3.5e+02,Ge1_WD40|PF16529.1|0.45,Ge1_WD40|PF16529.1|4.2e+02,PD40|PF07676.8|8.9,PD40|PF07676.8|0.85,PD40|PF07676.8|12,PD40|PF07676.8|6e+02,PD40|PF07676.8|1.1e+02,DUF3312|PF11768.4|0.00043,DUF3312|PF11768.4|1.8 R_Transcript_4068:177-1610(+)
MDNDNDNDNGNDNRVMCQLADPEGTPLGTTMYLPQNVGPKELLQIVNKLLNNEEKLPYAFYISDNELVVELGTYLQKNKVSVEKAVQIVYQPQAIFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTNVRLWDIYTQTPLHTCTGHKNWVLCIAWSPDGKHLVSGSKAGELQCWDPQTGKPSGNPLVGHKKWITGISWEPVHLQAPCRRFVSSSKDGDARVWDVALRKCVLCLSGHMLAVTCVKWGGEGLIYTGSQDCTIKVWETKQGKLIRELKGHGHWVNSLALSTEYVLRTGAFDHTGKQYSSPEEMKEVALARYNQMRGNAPERLVSGSDDFTMFLWEPDVSKHPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSVKLWNGVTGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGRDRVLKLWMG*

Click here to download the sequence:
Link to NCBI Protein BLAST