Transcript Information: R_Transcript_406972.p1


Annotated TAIR IDAT3G47470.1
Annotated Gene Namelight-harvesting chlorophyll-protein complex I subunit A4
Annotated Gene Symbol(s)LHCA4, CAB4
Annotation TypeOrtholog
Chromosome Positionchr3:17493622-17494773 | Reverse length=251
E-Value4.8E-134
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52151317013482
Replicate 20.34279674149058
Replicate 30
Condition 2: 8 Hour
Replicate 10.49971152953562
Replicate 20.27380671642268
Replicate 30.074088206613824
Condition 3: 24 Hour
Replicate 10.093705335623282
Replicate 20.2700643945785
Replicate 30.1786751403012


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_406972.p1 GENE.R_Transcript_406972~~R_Transcript_406972.p1 ORF type:complete len:245 (+),score=-13.72,Chloroa_b-bind|PF00504.17|2.7e-45 R_Transcript_406972:49-783(+)
ATGGCGTCCGTCACCGCCCGCGCCCCGGTCGCAGCCCTCCGTCCGTCGGCGTCGCTCAAGTCTACCTTCCTAGGGCAATCCTCCACCCGTCTTGCCCGCGCACCGACTACGAGGCGTAATGTTCGGGCGGAGGCCAAGGGAGAGTGGCTCCCCGGCCTCCCTTCTCCCACCTACCTCAACGGCAGCTTGCCAGGCGATAACGGGTTCGACCCGTTGGGTCTGGCGGAGGACCCGGAGAACCTGCGGTGGTTCGTGCAGGCGGAGCTGGTGAACGGGCGGTGGGCGATGCTGGGGGTGGCCGGGATGCTGCTGCCGGAGGTGCTGACGAAGATCGGGTTGATCGACGCGCCGCAGTGGTACGACGCCGGCAAGGCCACCTACTTCGCGTCGTCGTCGACGCTGTTCGTCATCGAGTTCATCCTGTTCCACTACGTGGAGATCCGGCGGTGGCAGGACATCAAGAACCCTGGCTGCGTCAACCAGGACCCCATCTTCAAGAGCTACAGCCTCCCGCCGCACGAGTGCGGCTACCCCGGCAGCGTCTTCAACCCCCTCAACTTCGAGCCCACCCTCGAGGCCAAGGAGAAGGAGCTCGCCAACGGGAGGCTGGCGATGCTGGCGTTCTTGGGGTTCCTGGTGCAGCACAACGTGACGCAGAAGGGGCCCTTCGACAACCTGCTGCAGCACCTGTCTGACCCGTGGCACAACACCATCATCCAGACGCTGTCAGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_406972.p1 GENE.R_Transcript_406972~~R_Transcript_406972.p1 ORF type:complete len:245 (+),score=-13.72,Chloroa_b-bind|PF00504.17|2.7e-45 R_Transcript_406972:49-783(+)
MASVTARAPVAALRPSASLKSTFLGQSSTRLARAPTTRRNVRAEAKGEWLPGLPSPTYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVLTKIGLIDAPQWYDAGKATYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKSYSLPPHECGYPGSVFNPLNFEPTLEAKEKELANGRLAMLAFLGFLVQHNVTQKGPFDNLLQHLSDPWHNTIIQTLSG*

Click here to download the sequence:
Link to NCBI Protein BLAST