Transcript Information: R_Transcript_407125.p1


Annotated TAIR IDAT5G54130.2
Annotated Gene NameCalcium-binding endonuclease/exonuclease/phosphatase family
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21962900-21965279 | Forward length=436
E-Value2E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.42203377929986
Replicate 20.36409769508031
Replicate 30.13240888783903
Condition 2: 8 Hour
Replicate 10.28307358320515
Replicate 20.64626826130594
Replicate 30.41969041896849
Condition 3: 24 Hour
Replicate 10.26540817604282
Replicate 20.12748704561027
Replicate 30.25303704840344


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_407125.p1 GENE.R_Transcript_407125~~R_Transcript_407125.p1 ORF type:5prime_partial len:173 (+),score=15.51 R_Transcript_407125:3-521(+)
AGGCTTCACGGTGCTGGTTATCTAACTTACAAACTTGCTCGAACAAACAACCGCGGTGATGGTCTATTAACAGCAGTGCATCAAAGTCAGTTCCGAGTGTTAAATTACAAGGAGTTGTTGTTCAATGACATTGCTGATCGTGTAGCGCAGATTTTGCATGTTGAGCTAGTTTGTAATAACATTTTCCAGAGCAATTCCAGCAGCAAAGGCAAGGAGGTTTTAATTGTAAATACTCATTTGATATTTCCACATGATGCTAGGTACTGTTTCCTCCGGTTAAAGCAGGTGTACAATATTTTGCAATATACTAGGTCATACATCCACAAGCATACACTCCCCCTGCCGGTCTTCCTCTGTGGGGATTGGAATGGAAGTAAGAAGGGACATGTCTATAAGTTTTTGTGTTCACAAGGCTTTTTCTCGTCCTATGACATAGCACGCCATGAGAAAGATGAAACCGAAGATGCACAAAAGGTGGCAGCTACTTGTTTATTGATTTTTGACTTTCTTATAGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_407125.p1 GENE.R_Transcript_407125~~R_Transcript_407125.p1 ORF type:5prime_partial len:173 (+),score=15.51 R_Transcript_407125:3-521(+)
RLHGAGYLTYKLARTNNRGDGLLTAVHQSQFRVLNYKELLFNDIADRVAQILHVELVCNNIFQSNSSSKGKEVLIVNTHLIFPHDARYCFLRLKQVYNILQYTRSYIHKHTLPLPVFLCGDWNGSKKGHVYKFLCSQGFFSSYDIARHEKDETEDAQKVAATCLLIFDFLIV*

Click here to download the sequence:
Link to NCBI Protein BLAST