Transcript Information: R_Transcript_407711.p1


Annotated TAIR IDAT1G53250.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53800.1); Has 11909 Blast hits to 7704 proteins in 757 species: Archae - 51; Bacteria - 1338; Metazoa - 4550; Fungi - 987; Plants - 464; Viruses - 24; Other Eukaryotes - 4495 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19857468-19859156 | Forward length=371
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13323329164028
Replicate 20
Replicate 30.50160739261648
Condition 2: 8 Hour
Replicate 10.17872894122077
Replicate 20.48965434688727
Replicate 30
Condition 3: 24 Hour
Replicate 10.33515047047743
Replicate 20
Replicate 30.15976426778757


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_407711.p1 GENE.R_Transcript_407711~~R_Transcript_407711.p1 ORF type:internal len:137 (-),score=44.14 R_Transcript_407711:3-410(-)
GAAGAACTCAGTTGGGATAGTTATGAGAAAATTAAAGAAGAGATGGCATGCCAACAACTTCAAAGGGCTGCAGAAAAGGCCAAGGAGAAAGAAATGAAAAAGATTCTAGCAGAGAAAAGAATACAGAAAAGAGCAGAGAAGATGAGATGGCTTGCACAGAGAAAATTGGAGCCTAAACGGAAGGCCAAACCAAATGCGCAACAGAAAGGGAAGATGAGTTGCAAAACAAGGGAGGAAGACAAAGATCTAGCTCCTTCAAGGGACTCAAACCTTGAGGTTAGAATAACAAAGATTCATGGGAAGAAGTTAAAAGATGGACCATCCTGCAGTAATGCTGGTGTTATGAATTATCTTCAATCAGCATTGGAGAGCTTTGATATTGAATCTATCAGAAGAGAACTAACGAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_407711.p1 GENE.R_Transcript_407711~~R_Transcript_407711.p1 ORF type:internal len:137 (-),score=44.14 R_Transcript_407711:3-410(-)
EELSWDSYEKIKEEMACQQLQRAAEKAKEKEMKKILAEKRIQKRAEKMRWLAQRKLEPKRKAKPNAQQKGKMSCKTREEDKDLAPSRDSNLEVRITKIHGKKLKDGPSCSNAGVMNYLQSALESFDIESIRRELTR

Click here to download the sequence:
Link to NCBI Protein BLAST