Transcript Information: R_Transcript_40785.p1


Annotated TAIR IDAT1G09840.1
Annotated Gene Nameshaggy-like protein kinase 41
Annotated Gene Symbol(s)ATSK41, SK41
Annotation TypeOrtholog
Chromosome Positionchr1:3196114-3199524 | Reverse length=421
E-Value1.5E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.629802166186
Replicate 221.32182445376
Replicate 322.640380182244
Condition 2: 8 Hour
Replicate 121.353951988877
Replicate 226.087695481383
Replicate 322.021140016206
Condition 3: 24 Hour
Replicate 126.695124683377
Replicate 222.653657387609
Replicate 327.741393149672


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40785.p1 GENE.R_Transcript_40785~~R_Transcript_40785.p1 ORF type:complete len:258 (+),score=51.13,Pkinase|PF00069.21|1e-27 R_Transcript_40785:300-1073(+)
ATGGCCTCAGCAAGTTTAGGAAATGGGGGACCAGGTAGTTCAAAGGCGGCTGCCAATGGCCACAACAAAGGTTCTTCAAGTTCAGTTGATTGGCTGGGAAAAGAGATGCTTGAGCTTAGGCTCAGAGATAAAGTGGACCATGATGAGGACAGGGTGAATCCACATACACACCAGCTGAAACTTTGTGATTTTGGAAGTGCAAAAGTATTGGTCAAAGGAGAGCCCAATGTTTCTTATATATGCTCTAGATATTATCGTGCTCCTGAACTCATTTTTGGTGCAATTGAGTATACCACTGCAATCGATATATGGTCAACCGGATGTGTGATGGCAGAATTGCTTCTTGGGCAGCCGTTATTTCCTGGGGAAAGCGGGGTAGATCAATTGGTGGAGATCATCAAGGTTTTGGGAACACCAACAAGAGAGGAAATAAAGTGTATGAATCCAAACTATACAGAATTTAAATTTCCTCAGATAAAACCTCATCCATGGCACAAGGTCTTTCAGAAACGTTTGCCTCCTGAAGCAGTGGATCTCATTTGTAGGTTTTTCCAGTACTCTCCCAATTTGAGATGCACGGCTTTGGAAGCTTGTGTTCACCCTTTCTTTGATGAATTAAGGGATCCAAATACACGACTTCCTAATGGCCGTCCTCTCCCTCCTCTTTTCAACTATAAGCCACAAGAGCTCTCTGGCATCCCTCCTGACATGGTAAATCGCCTAATACCAGAGCATGCTCGAAGGCAAAATCTATTCATGGCATTGAACTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40785.p1 GENE.R_Transcript_40785~~R_Transcript_40785.p1 ORF type:complete len:258 (+),score=51.13,Pkinase|PF00069.21|1e-27 R_Transcript_40785:300-1073(+)
MASASLGNGGPGSSKAAANGHNKGSSSSVDWLGKEMLELRLRDKVDHDEDRVNPHTHQLKLCDFGSAKVLVKGEPNVSYICSRYYRAPELIFGAIEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLICRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNYKPQELSGIPPDMVNRLIPEHARRQNLFMALNS*

Click here to download the sequence:
Link to NCBI Protein BLAST