Transcript Information: R_Transcript_407959.p1


Annotated TAIR IDAT2G25625.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:10906562-10907099 | Forward length=152
E-Value3E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.69756538680454
Replicate 20.13373439755604
Replicate 30
Condition 2: 8 Hour
Replicate 11.2476873858469
Replicate 21.1394079919075
Replicate 31.8498456683197
Condition 3: 24 Hour
Replicate 11.6085087866544
Replicate 21.1238348479275
Replicate 31.2547091858731


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_407959.p1 GENE.R_Transcript_407959~~R_Transcript_407959.p1 ORF type:complete len:157 (+),score=32.73 R_Transcript_407959:130-600(+)
ATGGCTATGTCAAGTTGTTGTTGGCTCAATCCACTGCCTTCAAGTCCACTTGATCCCACATCATCAACCTCCTTGCCCACAAAGCCAAGTCTTGTTCCAAGGAAAAGTGAAGAAAGGCTATCATGGAAGAAGAAATATGTGGTGGGAATAGCATGTACACTTATATTTGGACTAGAGATGGGGGACACTGCTATGACCAGCATTAGTGGGAGTAACTCCATGGCAGGTGAATTGGCAATGGAATCTCAACAACTACCAAACAACAAGAAGAAGAAGAGCATTAAAGTTGCAAGATGGAGTGACAAAAGAATTTGCCCACCTTGGCATTTTAACTCATTGGAGACAATTGTGCCTGAGAACCTCCCTAGGCCATCTGCCCATAGAAAATGGGAGGGAGTTTCCTATTCCTCCAGATTAGCCCCTTCTGTTAAGTTCTTAGCTAAATCAAGGACTGGTTGCTTCTCATTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_407959.p1 GENE.R_Transcript_407959~~R_Transcript_407959.p1 ORF type:complete len:157 (+),score=32.73 R_Transcript_407959:130-600(+)
MAMSSCCWLNPLPSSPLDPTSSTSLPTKPSLVPRKSEERLSWKKKYVVGIACTLIFGLEMGDTAMTSISGSNSMAGELAMESQQLPNNKKKKSIKVARWSDKRICPPWHFNSLETIVPENLPRPSAHRKWEGVSYSSRLAPSVKFLAKSRTGCFSL*

Click here to download the sequence:
Link to NCBI Protein BLAST