Transcript Information: R_Transcript_40799.p1


Annotated TAIR IDAT1G15240.2
Annotated Gene NamePhox-associated domain;Phox-like;Sorting nexin, C-terminal
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5243799-5248604 | Forward length=1020
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.0196899767242
Replicate 25.4805824669005
Replicate 38.288486510939
Condition 2: 8 Hour
Replicate 16.5016473082244
Replicate 26.8833677674937
Replicate 38.9042554348433
Condition 3: 24 Hour
Replicate 19.1128649751733
Replicate 27.2260254150946
Replicate 37.8015581062208


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40799.p1 GENE.R_Transcript_40799~~R_Transcript_40799.p1 ORF type:complete len:1111 (+),score=266.80,PXA|PF02194.11|2.8e-40,PXA|PF02194.11|7.8e+03,Nexin_C|PF08628.8|1.6e-28,PX|PF00787.20|1.5e-15 R_Transcript_40799:490-3822(+)
ATGAGCACTCAGAGGCAATTGGTCACAACTCGTGACCTTTTAGAGGAAGCGAAGAAGCGAATTGTCATTCTCTCCATATGTGTCGTTGGTCTCTCTTATCTCATGTCCTTGACAAGCACATCAGTGTGGGTGAATCTGCCAGCTGCAGCCTTCTTGGTCATTCTTGTCCGCTACTTTTCAATGGATTTTGAGATGCGAAGAAAAGCGGCAGCTTATGACAGTAGAGCAACCACTGAAAACACTGCTATTCAAGAGAAACGTCTGGAAACTCCAAAACCAGCTGTCGAGAAAGACCAGTGGAGAAGCAAAGTCAATTCCCGTCTTGTTGAAGATGCCATTGATCAGTTTACAAGACATATAGTCTCCGAGTGGGTGACTGATCTCTGGTATTCTAAATTAACACCTGATCAAGAGGGCCCAGAGGAACTGGTGCAATTAATTGATGGTGTTTTGGGAGAAATTTCATATCGCTTGAGACATATCAATCTCATCGATCTTCTGGCTAGAGATGTCATCCATCTTGTATGCAAGCATCTGGAGCTATTTCGTGCTTGTCAAGTGAAGATTGAGAAGAAGAACTTGGGAGGGCTTTCTTTTGATCAACGTGATATGCAGTTGAAAATTACTCTGGCTGCTGAAAACAAATTGCATCCACTTTTGTTCTCTGCCGAATCAGAGCACAAGGTATTGCAGCACATTACGGATGGTCTAATTTCTGTTACTTTCAAGCCTGAAGATCTGCAATGTTCTTTCTTTCATTATGTTGTTCGAGAACTTCTTGCATGTGCAGTGTTGAGACCAGTCTTGAACATGGCTAACCCGAGATTTATTAATGAAAGAATTGAACAAGTAGCCATGTCTGTGAGGAAAGCAAATAAAGGAGCTCCAACTGCAGATGATACACCCTCATCCACAGAAAATGGATCCACTAACGTATCATCTGATAACTTTTCTCCGTTCCCGGATCCTTCTACCACAGGCGTTGAACTTGTTGAGCTTAAAACTACAGAATCTAAAAGTTCGATGGGCAAAAATGACAGAGAGAAGGTGAATGGTACAGACACAGCTAAAGATCCTTTGCTTGCAATTGACGCCCGGTCAAGTCGTTCTTGGAGTTCGTTGCCCTTAAGCTCCCAGGAAGCTGGCAGAAGTCACATTGAAAGATCCACCTCTGGAGGAGAGTGGGGTGATATGCTGGATTATTTTTCTCGTAGAAAGACACAAGCTCTTGCTCCAGAACACTTTGACAATATGTGGTCAAAAGGCAGAAACTACAGTAAGGACACTCGAGCAGGGGATCCTGGTGGTCAAAGTTCTTCGGCGAAGAGACCGAATGCAGTCAATTCATCGAACATCTTGCCAAAACATAAAGTAAGTGGAGACAGGGCCACTACTGCAGAGAAAGGTGCAGCTCTTTCTGGTTGCAATGTAAGGTCTCAGTCTGAAACAATGTACATACATTCTGACAGAAACACATCAACTCCACCTCCCCTTACATCAGATGAAGACGAGGAGGAGCCGAAGCTCACAACTTCTGATGAGACAGAACCAGTGAGCAGTAGTCACAATTCCTCAGAAGATGAAGACAGTAGGATAACAGGTCTAGATTCTCCAACAACCAAAGTCTGGGATGGTAGACATAATAGAAATTCTGGAGTTTCTCATATTCGCCATCCACTGGAGAGCATAGATGGTAAAACAACCAGGAGAACAAATAAAGGGCAATACCAAAGGTTGCAAAGGCAACAAAGTGGCCGGAAAAGGTCTAGGTTGGGTAGTCAAAAGTTGCCCATGTGGCAGGAGGTTGAGAGGACAAGCTTCTTGTCAGCAGAGGGACAAGACATTCATCCTTTGAAACAGCAGGTGAAAGATGATGACTCGAGTGATGAGTACGATATGGCGATTATGGGTAGACTTCAGAGTGGAACTACTGCTTCTTCATCAGCTTCTTCCTTACCTGGAAGCTTTAGTTCATCTGTTAATTCTCCCCAAACTGCGTTCTTAGGAGATACATATTTCAAGTTGAGATGTGAGGTTTTAGGTGCAAACATTGTCAGAAGCAGCTCCAAAACATTTGCCGTGTATTCCATATCTGTCATAGATGCTGAAAATAACAGTTGGTCAATCAAAAGAAGATACCGACATTTTGAGGAGCTACATCGACGATTGAAGGAATATCAAGAGTATAGTCTTCACTTACCACCTAAACATTTCCTATCAACAGGTCTTGATGTGCCTGTGATTCGAGAACGATGTAGATTGCTTGATGAATATTTGAAGAAGCTCATGCAACTTCCATCTATTTCGGGATCAATTGATGTGTGGGACTTTCTAAGCATTGATTCTCAGACATATACATTTTCAAGTGCCTTTTCTATTGTGGAAACATTGTCAGTTGACCCAATTCACAAGTCACATGATAAGGCTCTGCGCACTTCTGATTTTGAAAGCCCTCCAATAGATCACTCAAAATCCAGTAGAGATTGTGTAGAATCTGCAAATGGAGCTGCTACATCTCTGATGAATCATAGCTCTGCAGATGGCCTGAAATGTGGTGTGAAAGGCAAAACAAATTCACCTGGGAAAGTGCCTGTCCAAAATGTTGGAAAAAAGGGAAAGGGGATAGAAGGCGATATGCAGCAAAAATCTGAACTTTTTCTAGATACCGCTGATGATCCGACTTTTCCTCCAGAGTGGGTGCCACCAAATTTGAGTGGCCCTATATTAGACTTGGTGGATGTCATTTTTCAGCTTCAGGAAGGAGCATGGATCAGGCGAAAGGCTTTTTGGGTAGCCAAACAGGTGTTGCAGTTGGGAATGGGTGATGCACTTGATGATTGGTTGCTTGAGAAGATCCAGCGTTTGCGTAGGGGATCCGTTGTTGCTTCAGTGATAAAGCGGGTTGAGCAGATACTGTGGCCTGATGGAATATTCATCACGAAGCATCCAAGAAGGCAGAGGCAGCCTGGCTCTGGTACTCCATCTCAGAGTCCGTCTCACAAAAAGCTTCCTGATGAAATGTCGTCTCCTAAGGAACAGGATGTTCAGAAGCTGTTTGAGCAGCAAGAAAGAGAGGCTGAGGAACGGGCGAAGTTTGTCTACGAGCTAATGATTGATAATGCTCCAGCTGCTGTTGTAAGTCTTGTTGGTCGGAAGGAGTATGAACAATGTGCCAAGGATCTTTACTTCTTCATTCAGTCATCTGTATGTCTGAAACAGCTGGTTGTGGATCTTCTGCAATTCTTCCTTTTGTATACATTCCCAGAGCTCGATCATACCTTCAAGCAACTACGTGATGAAAAACAGAAGTTTGGGGAATTTAAACCTACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40799.p1 GENE.R_Transcript_40799~~R_Transcript_40799.p1 ORF type:complete len:1111 (+),score=266.80,PXA|PF02194.11|2.8e-40,PXA|PF02194.11|7.8e+03,Nexin_C|PF08628.8|1.6e-28,PX|PF00787.20|1.5e-15 R_Transcript_40799:490-3822(+)
MSTQRQLVTTRDLLEEAKKRIVILSICVVGLSYLMSLTSTSVWVNLPAAAFLVILVRYFSMDFEMRRKAAAYDSRATTENTAIQEKRLETPKPAVEKDQWRSKVNSRLVEDAIDQFTRHIVSEWVTDLWYSKLTPDQEGPEELVQLIDGVLGEISYRLRHINLIDLLARDVIHLVCKHLELFRACQVKIEKKNLGGLSFDQRDMQLKITLAAENKLHPLLFSAESEHKVLQHITDGLISVTFKPEDLQCSFFHYVVRELLACAVLRPVLNMANPRFINERIEQVAMSVRKANKGAPTADDTPSSTENGSTNVSSDNFSPFPDPSTTGVELVELKTTESKSSMGKNDREKVNGTDTAKDPLLAIDARSSRSWSSLPLSSQEAGRSHIERSTSGGEWGDMLDYFSRRKTQALAPEHFDNMWSKGRNYSKDTRAGDPGGQSSSAKRPNAVNSSNILPKHKVSGDRATTAEKGAALSGCNVRSQSETMYIHSDRNTSTPPPLTSDEDEEEPKLTTSDETEPVSSSHNSSEDEDSRITGLDSPTTKVWDGRHNRNSGVSHIRHPLESIDGKTTRRTNKGQYQRLQRQQSGRKRSRLGSQKLPMWQEVERTSFLSAEGQDIHPLKQQVKDDDSSDEYDMAIMGRLQSGTTASSSASSLPGSFSSSVNSPQTAFLGDTYFKLRCEVLGANIVRSSSKTFAVYSISVIDAENNSWSIKRRYRHFEELHRRLKEYQEYSLHLPPKHFLSTGLDVPVIRERCRLLDEYLKKLMQLPSISGSIDVWDFLSIDSQTYTFSSAFSIVETLSVDPIHKSHDKALRTSDFESPPIDHSKSSRDCVESANGAATSLMNHSSADGLKCGVKGKTNSPGKVPVQNVGKKGKGIEGDMQQKSELFLDTADDPTFPPEWVPPNLSGPILDLVDVIFQLQEGAWIRRKAFWVAKQVLQLGMGDALDDWLLEKIQRLRRGSVVASVIKRVEQILWPDGIFITKHPRRQRQPGSGTPSQSPSHKKLPDEMSSPKEQDVQKLFEQQEREAEERAKFVYELMIDNAPAAVVSLVGRKEYEQCAKDLYFFIQSSVCLKQLVVDLLQFFLLYTFPELDHTFKQLRDEKQKFGEFKPT*

Click here to download the sequence:
Link to NCBI Protein BLAST