Transcript Information: R_Transcript_4082.p1


Annotated TAIR IDAT3G52170.1
Annotated Gene NameDNA binding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19347039-19349099 | Reverse length=499
E-Value3.5E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5955165717425
Replicate 25.5930948254832
Replicate 35.7630058645711
Condition 2: 8 Hour
Replicate 14.9178798519837
Replicate 24.8220083463022
Replicate 35.9865777098951
Condition 3: 24 Hour
Replicate 14.708049262341
Replicate 25.4089007004376
Replicate 36.0619224397115


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4082.p1 GENE.R_Transcript_4082~~R_Transcript_4082.p1 ORF type:complete len:473 (+),score=104.52 R_Transcript_4082:283-1701(+)
ATGAATGTTGTGAGAGGTAGCTGGGCTGGGCAAACTTTTGCCTTATCCACCACTAATGAATCAGGGGGGAGGAAGTCACGTATTAGGCGTTCAAAGGAGGAAAGGAAGGCTATGGTTGAGTCTTTTATTAAAAGATACCAGTTCTCAAATAAAGGGAACTTTCCATCCCTTAATCTCACTCATAAGGAGGTTGGTGGGTCTTTCTATGTTGTTCGAGAGATTGTCAGAGAAATAATTCAAGAGAATAGAATTCTTGGTCCTGCCAGTTTTGATTCTGAAGCGCAAAATGATGATTCTATTTCAGAACAGTATCCATTGGGATCGATATCTAGGGAACCGCAAGATCTTTTCTTGCAGACAGAAAACAAGTTAAAGGTTGATTCCAATGAACAAATAAGAAAAAGCTTGGATATGACTTTAGATGGTAATGGGCACAATAGCAATCATCAGGATTTAGACTCTATTCAGCTCTGTATCGAACCTCAGACAGATGACCCTGATGAGCCTGCATCTAGAGAACTAGTGACCAGTCAGCAGGAACTTGAAAATTTGGAGTTGTCTTTGGATAGGAATGAACAGCATTGTGATGAGAAAGTAATGGAAAATAGTCATTTGAACAATATGCAGACAAATGAACTACATGAAGAATGTGATAAATTGTTAATTGAAGAATCGACCATAAGAGAGACCCTTGAAGCAGATAGAGAAGTTGAATTGCAAGGAGCATCGAAAGTTGAACTAACTCTCCCAACAGAAGTGGTAGAAGTGGAGACTTTCCCTTTAAGACCTTCCATTAAGGAAACTGATCACCTACATGTCACATCGACCAATATAGGGAATCTTAATGGAACATTGGACAAGTTGGAAACCAAACAGGTCCAAGGAAGCAGTAGCAGTCTTGTCCCAGGTAAAAACATTTCTCGTGATAGCCCATCTGACATGGTGACTGCAAAAAATGCACATGGTTTTGAAATTCCAATGTCAGAGAAAGATCATCATGTGGAAGTCAATGGTATGGTACTCCAGAATAGAGAGGTCGATACATCAAGAATTGAAGTGCCAGATTCATCAATGATGGAAAAGGAGAATCCTAAATTTGTTAATGATCACAAGACATTAAAGACAGCTGATCAAAGTGAGGAACTCGAAGGGCTTCAGCTTAAAGCTATTCCAAAGGGAACAGCCTACACAGTGCATAGCAATGCAACAAGCAGCAACAATGCTGATCACAAGGAACAAATGTTGAATGCCCAAAATGCAGATGATTCTGAACGAGATAACAAAGCTACAAACCGAAGTTCTCCAACTTTAGATAGAATTAATCTTGAATCCTGGGCAAACTCGAAGCATGAAAACAACCCTTTACTGGCATCCTTGAAGGCTTTTGTGGGTGCCTTCGTCAAGTATTGGTCTGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4082.p1 GENE.R_Transcript_4082~~R_Transcript_4082.p1 ORF type:complete len:473 (+),score=104.52 R_Transcript_4082:283-1701(+)
MNVVRGSWAGQTFALSTTNESGGRKSRIRRSKEERKAMVESFIKRYQFSNKGNFPSLNLTHKEVGGSFYVVREIVREIIQENRILGPASFDSEAQNDDSISEQYPLGSISREPQDLFLQTENKLKVDSNEQIRKSLDMTLDGNGHNSNHQDLDSIQLCIEPQTDDPDEPASRELVTSQQELENLELSLDRNEQHCDEKVMENSHLNNMQTNELHEECDKLLIEESTIRETLEADREVELQGASKVELTLPTEVVEVETFPLRPSIKETDHLHVTSTNIGNLNGTLDKLETKQVQGSSSSLVPGKNISRDSPSDMVTAKNAHGFEIPMSEKDHHVEVNGMVLQNREVDTSRIEVPDSSMMEKENPKFVNDHKTLKTADQSEELEGLQLKAIPKGTAYTVHSNATSSNNADHKEQMLNAQNADDSERDNKATNRSSPTLDRINLESWANSKHENNPLLASLKAFVGAFVKYWSG*

Click here to download the sequence:
Link to NCBI Protein BLAST