Transcript Information: R_Transcript_408399.p1


Annotated TAIR IDAT5G11700.2
Annotated Gene NameBEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3); Has 8203 Blast hits to 3102 proteins in 389 species: Archae - 3; Bacteria - 5624; Metazoa - 852; Fungi - 139; Plants - 704; Viruses - 77; Other Eukaryotes - 804 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3762961-3771123 | Reverse length=1476
E-Value4E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28299164270882
Replicate 20.32552403746198
Replicate 30.355143218545
Condition 2: 8 Hour
Replicate 10.56943871970338
Replicate 20.52002050793455
Replicate 31.2663914386316
Condition 3: 24 Hour
Replicate 11.0678049873351
Replicate 21.1967969940623
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_408399.p1 GENE.R_Transcript_408399~~R_Transcript_408399.p1 ORF type:internal len:129 (+),score=40.91 R_Transcript_408399:1-384(+)
CTTCATCCTCCTGAGGATTGCAATGTCAATTCCTCACTATCCTTCACTCTTCAGATATGTAGAGTTGAAGATATTTTTGTTGAAGGAGGTATTGAAGGATCAGTTGTTCATTTTCACAGAGCTAGAACGATAGATGTGCAGCCATCAGGAACAATTACTGCATCTGGATTGGGTTGCACAGGTGGGATTGGCAGAGGAAAAGTCCTGAGCAATGGTCCTGGTGGTGGTGGAGGGCATGGTGGTCATGGTGGGGCTGGATGTTACAATGGTACTTGTGCTGACGGTGGTGAGTCATATGGAAGTAAACACTTACCCTGTGAACTTGGTAGTGGTAGCGGAAATAACAGCCTAGCAGGTTCCACTGCTGGTGGTGGTATTGTTGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_408399.p1 GENE.R_Transcript_408399~~R_Transcript_408399.p1 ORF type:internal len:129 (+),score=40.91 R_Transcript_408399:1-384(+)
LHPPEDCNVNSSLSFTLQICRVEDIFVEGGIEGSVVHFHRARTIDVQPSGTITASGLGCTGGIGRGKVLSNGPGGGGGHGGHGGAGCYNGTCADGGESYGSKHLPCELGSGSGNNSLAGSTAGGGIVV

Click here to download the sequence:
Link to NCBI Protein BLAST