Transcript Information: R_Transcript_408448.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.33801779545776
Replicate 20
Replicate 30.28279922958213
Condition 2: 8 Hour
Replicate 10.30229462897834
Replicate 20
Replicate 30.56023489569096
Condition 3: 24 Hour
Replicate 10.14171485943027
Replicate 20.27228714679725
Replicate 30.40532786457217


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_408448.p1 GENE.R_Transcript_408448~~R_Transcript_408448.p1 ORF type:complete len:162 (+),score=13.92,RVT_1|PF00078.23|5.4e-18 R_Transcript_408448:216-701(+)
ATGGAAATGAGGCTGCCACAAACGATGGTGGAAGCAATCATGAATTGCGTAACAGGCTCCTCGATGCAAATACTCTGGAATGGTACCCTGACGGAGCCTTTTCACCCATCTAGGGGTATTCGACAAGGGGACCCTTTGTCCCCCTACTTATTTGTGCTTTGTTTGGAGTGGCTCCAGCATATGATCGACGAGGCAGTGGCTAGAGGTACATGGACTCCCGTAGCGGTTTGCAGGGGTGGACCTTCCATCTTTAGCCTCTGCTTCGCTGACGACTTAATTCTCTTTGCAAAAGCTACAGTAGAGGAGGCCTCAGTAAATCATAATTGTCTTGATGCATTTTGTTATGCTTCGGGTGAGAAGGTGAGTTTTGCAAAGTCCAGAGTATATTTCTCACATAACACCAAGGAGAATGTTCGAGATGCAGTTTGCGAGTCCTTGGGCATAGAAGAGACAGAAGACCTTGGAATGTACCTTAGTGTGCCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_408448.p1 GENE.R_Transcript_408448~~R_Transcript_408448.p1 ORF type:complete len:162 (+),score=13.92,RVT_1|PF00078.23|5.4e-18 R_Transcript_408448:216-701(+)
MEMRLPQTMVEAIMNCVTGSSMQILWNGTLTEPFHPSRGIRQGDPLSPYLFVLCLEWLQHMIDEAVARGTWTPVAVCRGGPSIFSLCFADDLILFAKATVEEASVNHNCLDAFCYASGEKVSFAKSRVYFSHNTKENVRDAVCESLGIEETEDLGMYLSVP*

Click here to download the sequence:
Link to NCBI Protein BLAST