Transcript Information: R_Transcript_408450.p1


Annotated TAIR IDAT2G28305.1
Annotated Gene NamePutative lysine decarboxylase family protein
Annotated Gene Symbol(s)LOG1, ATLOG1
Annotation TypeOrtholog
Chromosome Positionchr2:12081186-12084307 | Forward length=213
E-Value1E-97
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35790119519056
Replicate 20.13723072167515
Replicate 30.074858619595269
Condition 2: 8 Hour
Replicate 10.16003833298853
Replicate 20.21922433177633
Replicate 30.17795696686654
Condition 3: 24 Hour
Replicate 10.30010205526411
Replicate 20.28830403778532
Replicate 30.14305689337841


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_408450.p1 GENE.R_Transcript_408450~~R_Transcript_408450.p1 ORF type:5prime_partial len:306 (+),score=55.80,Lysine_decarbox|PF03641.10|9.3e-42 R_Transcript_408450:2-919(+)
AGCAAATGTCCCAATCCAAAAATAGTGAGCAAACAGGGTAAGGACTTGATTTTAACTTGGCAGCGAGGGGAATGCACAACGAAAAGTGGAACTAGGTGGGGATATAACAGAGATAAAGACGGGCCAAGTGTCATAGTGCCGGGGTTCCTATACCTTTCCAGAGCAGTGCAATTCAAATTGTACAAGTGGAAACCAAAAGGACTTACACTGTCTGAAAAACATAACACACCTCTCCAACTGTATCAATTTGAAAGTATGGAGAGAGAGCAGATTATTACATCAACAAATGAGAAGAACAGAAGGTTTAAGAGGATCTGTGTGTTCTGTGGTAGCAGACCTGGATACAAACCCATATTTGGTGATGCAGCTCTTGAGCTTGGTAAAGCACTGGTTGACAGGAAAATTGATTTGGTTTATGGAGGAGGAAGTGTAGGTCTCATGGGAATCATCTCCAAGGCAGTACATCAAGGCGGATGCCATGTTCTTGGTGTAATTCCTCAACCACTCTTGCCACATGAGATAGTAGGAGAAACATATGGAGAAGTTAAGATAGTTGCAAGCATGCATCAGAGGAAGTCAGAAATGGAAAAGCATGCTGACGCTTTTATTGCCCTCCCTGGTGGATATGGAACCATGGAAGAAATGTTAGAAATGATCACATGGTCCCAGTTGGGAATTCATGAAAAACCAGTTGGATTGTTGAATGTAGGTGGGTACTTCAACAGTTTGCTTGCATTATTTGATAAAGGAGTTGAGGAGGGTTTCATAGAAGGCACAGCAAGGGACATAGTGATTTTAGCAGATTCAGCAGAAGAGCTGATCAGAAAGATGGAGGACTATGCGCCAGCTCATGTTAGAGTTGCACCAAGACAAAGTTGGGAAGCCGAACAATTATTAGACAACGGGAGAAATCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_408450.p1 GENE.R_Transcript_408450~~R_Transcript_408450.p1 ORF type:5prime_partial len:306 (+),score=55.80,Lysine_decarbox|PF03641.10|9.3e-42 R_Transcript_408450:2-919(+)
SKCPNPKIVSKQGKDLILTWQRGECTTKSGTRWGYNRDKDGPSVIVPGFLYLSRAVQFKLYKWKPKGLTLSEKHNTPLQLYQFESMEREQIITSTNEKNRRFKRICVFCGSRPGYKPIFGDAALELGKALVDRKIDLVYGGGSVGLMGIISKAVHQGGCHVLGVIPQPLLPHEIVGETYGEVKIVASMHQRKSEMEKHADAFIALPGGYGTMEEMLEMITWSQLGIHEKPVGLLNVGGYFNSLLALFDKGVEEGFIEGTARDIVILADSAEELIRKMEDYAPAHVRVAPRQSWEAEQLLDNGRNQ*

Click here to download the sequence:
Link to NCBI Protein BLAST