Transcript Information: R_Transcript_40868.p1


Annotated TAIR IDAT5G58620.1
Annotated Gene Namezinc finger (CCCH-type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23693959-23695782 | Forward length=607
E-Value1.1E-214
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 154.653980789704
Replicate 228.44757369622
Replicate 339.395639227866
Condition 2: 8 Hour
Replicate 137.221329187048
Replicate 252.014752443792
Replicate 373.701798294847
Condition 3: 24 Hour
Replicate 154.722704297071
Replicate 239.357229227151
Replicate 365.222844138829


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40868.p1 GENE.R_Transcript_40868~~R_Transcript_40868.p1 ORF type:complete len:696 (+),score=197.53,Ank_4|PF13637.2|7.3e-09,Ank_4|PF13637.2|8.1,Ank|PF00023.26|1.4,Ank|PF00023.26|1.4e-05,Ank_2|PF12796.3|3.6e-09,Ank_3|PF13606.2|0.0047,Ank_3|PF13606.2|0.029,Ank_5|PF13857.2|0.00033,Ank_5|PF13857.2|0.13,Ank_5|PF13857.2|8.9e+03 R_Transcript_40868:237-2324(+)
ATGTGCAGTGGTTCCAAAAGGAAAGTAACTTCTGTGGGGTTGGTGATGGAGGAGAACAATGAGGTTCAAAAGAAAGATTTACTTGGGGCTAATCAAACCTCTTCACTCTTGCTTGAGTTATCAGCCACTGATGATATTGAGGGATTTAAGCATGCTGTGGAGGAAGAGGGTTATGACGTGGATGAAGCTGGGGTTTGGTATGGGAGGAAACTTGGGTCAAAAAAGGTGGGATTCGAAGAGAGGACTCCTTTGATGGTGGCTGCCATGTTTGGCTGCAAGGATGTGTTGAACTATATCCTAGGAAAGAGCCATGTCGATGTCAATCGAGCTTGTGGGTCTGATGGTGCCACTGCCCTTCATTGTGCTGCTGCTGGTGGTTCTCTATACTCTCATGAGGTCATCAGGCTCCTGATTGACTCTTCTGCTGATGTGAACCGGGTGGATGTCCATGGACATCGGCCTGTTGATGTTATTGCTCCTTGCTTAGGTTCGAAGTTAAAGAGGAAAACTCTAGAGCTGATGCTGAAGAAGGGTGGTTCTGCTGATGAAGGAGCTGATCAATCAGAAGTTGAGGAGATACAGCAGCTGCAAGAGGCTGTGTCTCCGAAATCATCTAATGATGGGAGTGGATCGGAGAAGGAGTATCCGGTTGATCCATCCCTACCTGACATCAAGAATGGGATATATGGAACTGATGAGTTCAGGATGTATACTTTTAAGGTTAAGCCTTGCTCAAGGGCTTACTCTCATGATTGGACTGAGTGCCCTTTTGTCCATCCTGGGGAGAATGCAAGGCGACGTGACCCAAGGAAGTATCATTATAGCTGTGTCCCATGTCCGGAGTTCAGAAAAGGGTCATGCCCCAAGGGAGATGCTTGTGAGTATGCACATGGTATCTTTGAGTGCTGGCTTCACCCTGCTCAGTATCGAACCCGTCTTTGCAAGGACGAGACCAATTGTACTCGAAGGGTATGTTTCTTTGCTCACAAGCGAGAGGAGCTCCGCCCCTTGTATCCTTCCACTGGATCTGCTGTTCCCTCTCCTAGGTCGTACTCATCGAGTGCTAATGCATTTGAAATGGCATCTATGAGCCCTCTTGCACTGGGTTCCCCTTCTGTTTTGATGCCCTCAACCTCCACTCCCCCGATGACCCCAACTGGGGCCTCTTCTCCAATGGGAGGGGCAGCTTCTTGGCAAAACCAGCTTAATATCACTCCCCCAACCTTGCAGCTTCCTAGTAGCAGGTTAAAAGCTGCACTAAGTGCCAGGGATATGGACTTGGAGGCTGAGTTTCGCAGGCGGCAATTGTTGGATGAGCTTGCTGGTCTGTCTTTGTCCTCCCCAACCAACTGGAGCAGTTCCTTTAACAACTCACCAGTGTTTCCTTCCTCCACTGATCGGGCTGGGGAGTTAGGAAGGCTTGGTGGTCTGAAGCCGGCTAACCTCAATGATGTCTATGGATCCCTTGATCCTACTTTACTGGCCCAAGCCCAAACCCAGTTGCAATCTCCGACTGGGAGGCAGATTCGCCAGAACATGAACCAGCAGCTCCGCTCAAGCTACTCTTCTGGCATGCCTTCCTCCCCTGTGAGGGCTCCATCATTTGGTATGGAACCATGTGGATCACCCGTTTCAAATCCTAGACTGTCTGCTTTTGCTAAGCGGAGCCAGAGCTTCATTGATAGAGGAGTGGTCAATCAACAACCACCAGGAGTAGGTGGGCTTTCTTCGCCTGCTTTTTCAAATGCAATGTCGTCTCATCTCTCAGATTGGGGTTCTCCAGATGGTAAAGTGGACTGGGGGATTCAGGGAGATGAGCTGAATAAGCTTAGAAAATCAGCTTCATTTGGCTTCCGAAGCAACGGCAGTCATGTTGGTGGAAACCCTCATTCATCAAAAGCTGTCTTTAATGAGCCTGATGTTTCTTGGGTTCAGTCTCTTGTGAAGGATGCTCCAACTGCGAAGTCAGCACATTTCGAGTATGAAGAGCAGCTGAAGCAGCAGTATCATCTCAACAGCGGTGGTTCTGAAAAGATTCCGCCTTGGGTTGAGCAGTTTTATATGGAGCAAGAGCCAATGGCAGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40868.p1 GENE.R_Transcript_40868~~R_Transcript_40868.p1 ORF type:complete len:696 (+),score=197.53,Ank_4|PF13637.2|7.3e-09,Ank_4|PF13637.2|8.1,Ank|PF00023.26|1.4,Ank|PF00023.26|1.4e-05,Ank_2|PF12796.3|3.6e-09,Ank_3|PF13606.2|0.0047,Ank_3|PF13606.2|0.029,Ank_5|PF13857.2|0.00033,Ank_5|PF13857.2|0.13,Ank_5|PF13857.2|8.9e+03 R_Transcript_40868:237-2324(+)
MCSGSKRKVTSVGLVMEENNEVQKKDLLGANQTSSLLLELSATDDIEGFKHAVEEEGYDVDEAGVWYGRKLGSKKVGFEERTPLMVAAMFGCKDVLNYILGKSHVDVNRACGSDGATALHCAAAGGSLYSHEVIRLLIDSSADVNRVDVHGHRPVDVIAPCLGSKLKRKTLELMLKKGGSADEGADQSEVEEIQQLQEAVSPKSSNDGSGSEKEYPVDPSLPDIKNGIYGTDEFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCPKGDACEYAHGIFECWLHPAQYRTRLCKDETNCTRRVCFFAHKREELRPLYPSTGSAVPSPRSYSSSANAFEMASMSPLALGSPSVLMPSTSTPPMTPTGASSPMGGAASWQNQLNITPPTLQLPSSRLKAALSARDMDLEAEFRRRQLLDELAGLSLSSPTNWSSSFNNSPVFPSSTDRAGELGRLGGLKPANLNDVYGSLDPTLLAQAQTQLQSPTGRQIRQNMNQQLRSSYSSGMPSSPVRAPSFGMEPCGSPVSNPRLSAFAKRSQSFIDRGVVNQQPPGVGGLSSPAFSNAMSSHLSDWGSPDGKVDWGIQGDELNKLRKSASFGFRSNGSHVGGNPHSSKAVFNEPDVSWVQSLVKDAPTAKSAHFEYEEQLKQQYHLNSGGSEKIPPWVEQFYMEQEPMAA*

Click here to download the sequence:
Link to NCBI Protein BLAST