Transcript Information: R_Transcript_4089.p1


Annotated TAIR IDAT4G39910.1
Annotated Gene Nameubiquitin-specific protease 3
Annotated Gene Symbol(s)ATUBP3, UBP3
Annotation TypeOrtholog
Chromosome Positionchr4:18511858-18514139 | Reverse length=371
E-Value1.3E-234
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.158718847799
Replicate 233.719602027261
Replicate 339.2153388195
Condition 2: 8 Hour
Replicate 131.738471684337
Replicate 237.855514638746
Replicate 342.024924588505
Condition 3: 24 Hour
Replicate 130.943131480819
Replicate 230.146182668371
Replicate 334.43744840683


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4089.p1 GENE.R_Transcript_4089~~R_Transcript_4089.p1 ORF type:complete len:368 (+),score=77.68,UCH|PF00443.25|2.8e-66,UCH_1|PF13423.2|2.9e-35 R_Transcript_4089:326-1429(+)
ATGGGGGCTGCTGGTTCTAAATTGGAGAAAGTTCTGGGTGATCAGTTCCCTGAAGGTGAACGTTACTTTGGTCTCGAGAATTTCGGCAATACTTGCTACTGTAACAGCGTTTTGCAGGCTCTGTATTTTTGTGTCCCATTTCGAGAGAAATTACTGGAATACTATGAGAAGAACAAAAATCCTGCTGACCCAGAGGAAAATTTACTTACGTGCTTGGCAGATCTATTCACACAGATAAGTTCCCAGAAGAAGAAAACAGGTGTAATTGCTCCAAAACGCTTTGTACAGAGAGTGAGGAAAGAAAATGAACTTTTCCGTGGTTACATGCATCAGGATGCTCATGAATTTCTCAACTTTTTGCTGAATGAACTAGTTGATATACTGGAGAAAGAATATTCTGCTGCAAAAGATAGCTCAGAAAACCATTCTTCTGAGAAGATTGCAAATGGACCCAAAAATGGCCAAGCCAATGGGGTGCAAAAGGAACCTCTTGTTACCTGGGTTCATAAAAATTTTCAGGGTATATTGACAAATGAGACAAAGTGCTTGAGGTGCGAGACTGTAACAGCTAGAGATGAGACATTCTTTGATTTAAGTCTTGATATTGAACAGAACAGCTCTATTACAAGCTGCCTTAAGAACTTCAGTTCTACAGAAACCCTGAATGCCGAGGATAAATTTTTCTGTGACAAGTGCTGTAGTTTGCAAGAAGCACAGAAGAGAATGAAGATTAAAAAACCACCTCATATCCTTGTGATTCACCTAAAGCGTTTCAAGTACATTGAGAATCTTGGTCGGTACAAGAAGCTCTCTTATCGAGTTGTCTTTCCTTTAGAGCTGAAATTGACCAATACAATGGAGGATGCAGACTCGGAGTATTCCTTGTTTGCTGTTGTTGTACATGTGGGAACTGGACCAAACCATGGACACTATGTTAGCCTTGTGAAAAGCCACAATCACTGGTTGTTTTTCGATGATGAGAATGTTGAAATCATTGACGAGTCTGCCGTGCAGACTTTCTTTGGGTCAGCGCAAGAGTATTCGAGCAACTCAGAGCATGGATACATCTTGTTCTACGAGAGGATTACATGTGACACAAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4089.p1 GENE.R_Transcript_4089~~R_Transcript_4089.p1 ORF type:complete len:368 (+),score=77.68,UCH|PF00443.25|2.8e-66,UCH_1|PF13423.2|2.9e-35 R_Transcript_4089:326-1429(+)
MGAAGSKLEKVLGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREKLLEYYEKNKNPADPEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRVRKENELFRGYMHQDAHEFLNFLLNELVDILEKEYSAAKDSSENHSSEKIANGPKNGQANGVQKEPLVTWVHKNFQGILTNETKCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIENLGRYKKLSYRVVFPLELKLTNTMEDADSEYSLFAVVVHVGTGPNHGHYVSLVKSHNHWLFFDDENVEIIDESAVQTFFGSAQEYSSNSEHGYILFYERITCDTS*

Click here to download the sequence:
Link to NCBI Protein BLAST