Transcript Information: R_Transcript_408900.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value1E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.49332326904645
Replicate 20.3242671878965
Replicate 30.35377200920699
Condition 2: 8 Hour
Replicate 10.283620057304
Replicate 20
Replicate 30.070083438688753
Condition 3: 24 Hour
Replicate 10.26592054703904
Replicate 20.085155439731959
Replicate 30.50705107382774


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_408900.p1 GENE.R_Transcript_408900~~R_Transcript_408900.p1 ORF type:5prime_partial len:259 (+),score=29.61,zf-RVT|PF13966.2|2.1e+03,zf-RVT|PF13966.2|1.4e+04,zf-RVT|PF13966.2|2.4e-18 R_Transcript_408900:1-777(+)
GGGAGAGTAGAATTGGTGAACTCGGTATTATTTAGTATTGAAAACTTCTGGTCTAGTGTTTTCTTATTGCCCAAAGCCATTATTGGAAAAATTGAACAAATGTGTAGGAATTTTTTGTGGGGTATTTCTGAAAAAGGTAGGAGGATGATTTTTTTTGCATGGGCTAAGGTGTGTCAGGAGAAAAGAAAAGGTGGATTTCACATAAGGGAGATTCTTAGTTGGAATAAATGTCTTATCCTTAAACTGGTAGCTAAGCTGGATGGAGATGGAGACTCACTATGGGCAACCTGGTGCAAGAGATATTATGTAAAACACCAGACAATATGGGAGGTTACTCCAAAACCTGGTGATTCTTGGGGGTGGAAGGGTATCTTGAAGGTACGTGATGAATTCCTTCAAGAGGTGGGAGGAGTAGCTAAAGCTATCAATCTGGTGAGAGCTTGGAGAAATAGTAAGCATTCCTTTGTCACCTCTGCTTACAAGGAGTTCAGGAAGGGAGTTCAGAATGTGAGGTGGGCAAGCACTGTCTGGGATTCAGTTAACACCCCCAAGCATGCCTTGATTTCAGTTCTTGCGATTCAAAATGGGCTGCCAACTGTGGATAATCTAATGAGAAGAGGTTTTCAGATGGCCAACAGGTGCATCTTCTGCAAGAACCATCAGGAGTCGGTTTCACATCTCTTTTTCCAATGCCAGGATACTAACTTAATATGGCAGAGGATCTTGATATGGTTAGGATTGACTCGAAGGGCCATGAGTTTACAGAAGGAATTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_408900.p1 GENE.R_Transcript_408900~~R_Transcript_408900.p1 ORF type:5prime_partial len:259 (+),score=29.61,zf-RVT|PF13966.2|2.1e+03,zf-RVT|PF13966.2|1.4e+04,zf-RVT|PF13966.2|2.4e-18 R_Transcript_408900:1-777(+)
GRVELVNSVLFSIENFWSSVFLLPKAIIGKIEQMCRNFLWGISEKGRRMIFFAWAKVCQEKRKGGFHIREILSWNKCLILKLVAKLDGDGDSLWATWCKRYYVKHQTIWEVTPKPGDSWGWKGILKVRDEFLQEVGGVAKAINLVRAWRNSKHSFVTSAYKEFRKGVQNVRWASTVWDSVNTPKHALISVLAIQNGLPTVDNLMRRGFQMANRCIFCKNHQESVSHLFFQCQDTNLIWQRILIWLGLTRRAMSLQKEL*

Click here to download the sequence:
Link to NCBI Protein BLAST