Transcript Information: R_Transcript_408908.p1


Annotated TAIR IDAT2G01390.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:172256-174137 | Forward length=577
E-Value6.9E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.94411867007166
Replicate 20.36200517959135
Replicate 30.1974718758289
Condition 2: 8 Hour
Replicate 10.21108504264867
Replicate 20.19276622276884
Replicate 30.46943820569966
Condition 3: 24 Hour
Replicate 10.59373639381993
Replicate 20.19013154216015
Replicate 30.18868710936981


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_408908.p1 GENE.R_Transcript_408908~~R_Transcript_408908.p1 ORF type:internal len:116 (+),score=21.20,PPR_2|PF13041.2|0.027,PPR_2|PF13041.2|1.2e-10,PPR_2|PF13041.2|1.7e-12,PPR_2|PF13041.2|0.002,PPR|PF01535.16|0.00049,PPR|PF01535.16|3.5e-07,PPR|PF01535.16|3.4,PPR_1|PF12854.3|0.082,PPR_1|PF12854.3|7.3e-08,PPR_1|PF12854.3|3.9,PPR_3|PF13812.2|0.00082,PPR_3|PF13812.2|0.00026,PPR_3|PF13812.2|32 R_Transcript_408908:1-345(+)
GAAAAGGCTTGGTTGTTTTTCAATTGGGTTTCCAAGCTGAAGGGCTTTAAGCATGACCAATTTACTTTTACAACCATGTTGAGTATCTTTGGAGAGGCACAAAGAGTAGATTCTATGAAGTTTGTCTTCCACCAGATGCAAGAGAATGGGATAAAGATTAACGTTGTTACTTATACTGCACTTCTCCATTGGCTTTCAAATAATGGTGACTTTGATGGGGCAGTGAAGGTATGGGAGGAGATGAAAGCTAAGTGCTGTCATCCCACTGTTGTTTCTTATACGGCCTACATGAAGATTTTATTTGATGATGACAGAGCTCAGGAGGCCGTCGATATCTACAAAGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_408908.p1 GENE.R_Transcript_408908~~R_Transcript_408908.p1 ORF type:internal len:116 (+),score=21.20,PPR_2|PF13041.2|0.027,PPR_2|PF13041.2|1.2e-10,PPR_2|PF13041.2|1.7e-12,PPR_2|PF13041.2|0.002,PPR|PF01535.16|0.00049,PPR|PF01535.16|3.5e-07,PPR|PF01535.16|3.4,PPR_1|PF12854.3|0.082,PPR_1|PF12854.3|7.3e-08,PPR_1|PF12854.3|3.9,PPR_3|PF13812.2|0.00082,PPR_3|PF13812.2|0.00026,PPR_3|PF13812.2|32 R_Transcript_408908:1-345(+)
EKAWLFFNWVSKLKGFKHDQFTFTTMLSIFGEAQRVDSMKFVFHQMQENGIKINVVTYTALLHWLSNNGDFDGAVKVWEEMKAKCCHPTVVSYTAYMKILFDDDRAQEAVDIYKE

Click here to download the sequence:
Link to NCBI Protein BLAST