Transcript Information: R_Transcript_40920.p1


Annotated TAIR IDAT1G24440.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:8662340-8663777 | Forward length=251
E-Value2E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6778327825404
Replicate 24.6658445369551
Replicate 36.3629826655979
Condition 2: 8 Hour
Replicate 14.6639742756658
Replicate 27.9860292289949
Replicate 310.44437912681
Condition 3: 24 Hour
Replicate 18.1081144574034
Replicate 24.3760434306701
Replicate 36.6879097654408


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40920.p1 GENE.R_Transcript_40920~~R_Transcript_40920.p1 ORF type:complete len:252 (+),score=33.27,zf-C3HC4_3|PF13920.2|1.6e-09,zf-RING_2|PF13639.2|1.2e-07,zf-C3HC4_2|PF13923.2|4.6e-07,zf-RING_5|PF14634.2|1.1e-05,Prok-RING_4|PF14447.2|1.2e-05,zf-C3HC4|PF00097.21|1.2e-05 R_Transcript_40920:306-1061(+)
ATGTGGCAGAAACAGCCCACCAAATCTTCTTATAGAGAATCAATCAAAGCTCTTGAAGCTGATATACAGCATGCCAATAGTTTGGCAGCTTCTCTCCCAAGAGACTACTGTGGGGATTCTGTTCAGATGAGATTGTCTTACAGCCCATTGGCTCCCTTTCTTCTGTATTTGATAGAATGGATGGACTACAGTTGTACAGATGCCCTCCCTAATTTTTTGGGCTTGCATCACATTTTAGTATACAAGGTATATGTTGATGGAATGCCAACAATGTCTTCGCAAGAAAAGAAAGCCACTTTAAGGGAATTCTATGCTGTGATATATCCATCACTTAGGCAGCTAGAAGGTAATCTAATTGAATTTGATGAAAGCAACAAAAGAACTAGAAGCTCGGATATTTTGAGTCGAAAGAGGGTAGACGAAAAAAGGAAGCTCTTCGATAAGGATTTGGAGAGAGATGATGAGTGTGGGATTTGTATGGAACCTGGGATGAAGATGGTATTGCCCACCTGCGGGCATTCTATGTGCAGCCGGTGCTTTCATGACTGGAATACAAGATCGCGGTCCTGCCCATTCTGCCGGGGAAGCCTAAAGAGGGTCAACTCTAAAGATCTTTGGGTTCTTACTAGTAACTATGAAGTTGTTGATTCAATCACTATTGCTAGGGAGAACCTGAGTCGTTTCTACTTATACATTGAAAGTCTGCCACTTGTGGCACCCGACACCCATTTCTTTGTCTATGATTACATGATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40920.p1 GENE.R_Transcript_40920~~R_Transcript_40920.p1 ORF type:complete len:252 (+),score=33.27,zf-C3HC4_3|PF13920.2|1.6e-09,zf-RING_2|PF13639.2|1.2e-07,zf-C3HC4_2|PF13923.2|4.6e-07,zf-RING_5|PF14634.2|1.1e-05,Prok-RING_4|PF14447.2|1.2e-05,zf-C3HC4|PF00097.21|1.2e-05 R_Transcript_40920:306-1061(+)
MWQKQPTKSSYRESIKALEADIQHANSLAASLPRDYCGDSVQMRLSYSPLAPFLLYLIEWMDYSCTDALPNFLGLHHILVYKVYVDGMPTMSSQEKKATLREFYAVIYPSLRQLEGNLIEFDESNKRTRSSDILSRKRVDEKRKLFDKDLERDDECGICMEPGMKMVLPTCGHSMCSRCFHDWNTRSRSCPFCRGSLKRVNSKDLWVLTSNYEVVDSITIARENLSRFYLYIESLPLVAPDTHFFVYDYMI*

Click here to download the sequence:
Link to NCBI Protein BLAST