Transcript Information: R_Transcript_409354.p1


Annotated TAIR IDAT3G47090.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17341512-17344645 | Reverse length=1009
E-Value2E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.094540019101333
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_409354.p1 GENE.R_Transcript_409354~~R_Transcript_409354.p1 ORF type:5prime_partial len:259 (-),score=11.41,LRR_8|PF13855.2|0.00022,LRR_8|PF13855.2|9.1e-08,LRR_8|PF13855.2|0.00035,LRR_8|PF13855.2|0.02,LRR_4|PF12799.3|0.021,LRR_4|PF12799.3|0.034,LRR_4|PF12799.3|0.0095,LRR_4|PF12799.3|0.0014,LRR_4|PF12799.3|0.038,LRR_4|PF12799.3|0.044,LRR_4|PF12799.3|2.4,LRR_1|PF00560.29|10,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|3.3e+03,LRR_1|PF00560.29|24,LRR_1|PF00560.29|25,LRR_1|PF00560.29|0.4,LRR_1|PF00560.29|76,LRR_1|PF00560.29|1.5e+02,LRR_1|PF00560.29|40,LRR_1|PF00560.29|1.9,FNIP|PF05725.8|0.69,FNIP|PF05725.8|15,FNIP|PF05725.8|91 R_Transcript_409354:966-1742(-)
CCATTCGTAGCAAACATGAGCCACCTGACATGGCTTATTCTTCGAAATAATAGTTTGCATGGCCACATCCCCTCTGAGGTTAGTCGTCTTTCTAGATTAGTTTACATGTATTTAGACAATAACTTACTTGTTGGGCAAATCCCCGCCAACTTATCTGCCTGCATTAACCTCCAATATGTTCTTTTACATTGCAATAAACTAGAAGGTCAAGTTCCCAAGGGATTAGGAGCATTATCTAATCTGACACAACTTCAGATGGACAACAATAAATTGAGTGGCATATTTCCTCCATCTATTTACAATCTTTCCTCTCTTCAAATACTAATTTTGCACAACAACCAGCTTCAAGGAAGCCTTCCCCAAGATATAGGCTTCACACTTCCTCGACTAACTACTCTCAACATTTTCAATAACCATTTCTCAGGATCACTCCCAAACTCCATATCAAACCTCACAAGCTTAAATCTTCTTCAATTAGGCAATAACAGATTCAGTGGACCATCGAAACAACTTGATTTCCGAAGTATCAATGGGCTTAAATGTCTTGATCTTTCTTTTAGCAATCTCGAAGGTGATCTGAGCTTTATGGACACACTAGTAAATTGTACCCAATTAGACAAGTTGAATTTGATGGGTAATCATTTTACAGGAGTATTACCCAAATCTCTAGTTAATCTGTCCCCCACATTAACCACACTTTACTTGGCAGGAAATCAGCTCAGTGGAGAAATCCCTGCGGGTATTCAAACCTCATCAATCTTCATTTACTATACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_409354.p1 GENE.R_Transcript_409354~~R_Transcript_409354.p1 ORF type:5prime_partial len:259 (-),score=11.41,LRR_8|PF13855.2|0.00022,LRR_8|PF13855.2|9.1e-08,LRR_8|PF13855.2|0.00035,LRR_8|PF13855.2|0.02,LRR_4|PF12799.3|0.021,LRR_4|PF12799.3|0.034,LRR_4|PF12799.3|0.0095,LRR_4|PF12799.3|0.0014,LRR_4|PF12799.3|0.038,LRR_4|PF12799.3|0.044,LRR_4|PF12799.3|2.4,LRR_1|PF00560.29|10,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|3.3e+03,LRR_1|PF00560.29|24,LRR_1|PF00560.29|25,LRR_1|PF00560.29|0.4,LRR_1|PF00560.29|76,LRR_1|PF00560.29|1.5e+02,LRR_1|PF00560.29|40,LRR_1|PF00560.29|1.9,FNIP|PF05725.8|0.69,FNIP|PF05725.8|15,FNIP|PF05725.8|91 R_Transcript_409354:966-1742(-)
PFVANMSHLTWLILRNNSLHGHIPSEVSRLSRLVYMYLDNNLLVGQIPANLSACINLQYVLLHCNKLEGQVPKGLGALSNLTQLQMDNNKLSGIFPPSIYNLSSLQILILHNNQLQGSLPQDIGFTLPRLTTLNIFNNHFSGSLPNSISNLTSLNLLQLGNNRFSGPSKQLDFRSINGLKCLDLSFSNLEGDLSFMDTLVNCTQLDKLNLMGNHFTGVLPKSLVNLSPTLTTLYLAGNQLSGEIPAGIQTSSIFIYYT*

Click here to download the sequence:
Link to NCBI Protein BLAST