Transcript Information: R_Transcript_409356.p1


Annotated TAIR IDAT3G47110.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17347103-17350296 | Reverse length=1025
E-Value9E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.25439666835845
Replicate 20.10973676175765
Replicate 30.19953604177833
Condition 2: 8 Hour
Replicate 10.38392471171639
Replicate 20.38956240141438
Replicate 30.50596824028953
Condition 3: 24 Hour
Replicate 10.19998089919603
Replicate 20.038423795976616
Replicate 30.11439566909528


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_409356.p1 GENE.R_Transcript_409356~~R_Transcript_409356.p1 ORF type:5prime_partial len:574 (+),score=92.30,Pkinase|PF00069.21|2.3e-41,Pkinase_Tyr|PF07714.13|2.2e-37,LRR_8|PF13855.2|0.00042,LRR_8|PF13855.2|1.6e+02,LRR_8|PF13855.2|0.0024,LRR_8|PF13855.2|1.7e-07,LRR_4|PF12799.3|0.022,LRR_4|PF12799.3|2.3,LRR_4|PF12799.3|0.002,LRR_4|PF12799.3|1.8e-05,LRR_4|PF12799.3|0.057,LRR_1|PF00560.29|50,LRR_1|PF00560.29|13,LRR_1|PF00560.29|2.2e+03,LRR_1|PF00560.29|39,LRR_1|PF00560.29|0.052,LRR_1|PF00560.29|0.018,LRR_1|PF00560.29|5.6e+03,LRR_1|PF00560.29|2.3e+03 R_Transcript_409356:2-1723(+)
TCTTTCAACAATTTATCACATTTGACCAGGCTTTTACTAGGTGGAAACAAATTCCAAGGAAGAATACCTCCAGAGCTTGGGAATTGCCACAGCTTGTTGTACTTAGATCTATCACATAATGAATTCAATGGAACCTTACCAAATGAAATCTTTGGAGGATCAGCTAAATTTATTGAGGTAAATCTGTCCCGAAACAACATAGGAGGATCTCTGCCTCTGATCAGCCAGCAAACAAATCTAATAAGATTAGATGTGTCTAAAAATAAGCTGGCAGGGGAAGTTCCAAATGGCCTTGGCAAATGTCCTACCCTTCAGTACCTAAATATGGAAGGAAATTCATTCCATGGAGATATTCCTCCATCATTCTCTTCTTTGGAAAGCCTTCAAACACTTGACCTTTCACATAACAATCTCTCTGGCCCAATACCAAAATACTTCTCTAAATTTCCTTTGGTAAATCTAGTCTTATCTTACAACAATTTTGAGGGTAGGGTTCCAACAAATGGTGTCTTTGCAAATGCAAGTGCAATATCTTTAGTTGGAAACACTAAGCTTTGTGGAGGAATTCCTGAGCTGCATTTACCAATATGCACGGAGAAAGAAAGGAAGAAAAGAAGGATGCCTCTGACACTCAAGTTGACGGTTTCATTAATATGTGCACTTGTTGTGGGGGTAGCCATGGGAGTATGGATGTACTTGACTTGTCACAAACCCAAAAGAAAATCTGTTGACACTTGTTTACCGATCAGTGATGCATTCTTAAAAGTCTCCTACAACATGTTGCTCAAAGCAACAGATGGCTTCTCCTCTGAAAATCTGCTGGGTACTGGAGCTTTTGGGTCTGTGTTCAAAGGGTTCTTAGAACCTTATGGAAGGACAGTAGCAGTGAAAGTACTCAACCTTCAACATAAAGGTGCTTCTAAGAGTTTCATAGCAGAGTGTAAGGCCTTGAGAAATATCCGACATCGAAATATAGTGGGAATCCTAAGTGCTTGCTCTAGTACTGATTTTCAAGGAAATGATTTCAAAGCTCTTGTATACGAGTTCATGCCCAATGGAAGTCTTGAAAGATGGTTACACTATGTCGGAAATCTAAGTCTTGGTCAAAGGGTGGACATAGCTATTGATGTTGGCTGTGCACTCGACTATCTGCACAATGGCTGCGAGTTTCCAATGAGGCACTGTGACCTAAAACCAAGCAACATTTTGCTTGATGATGACATGGTCGCTCACGTGGGTGACTTTGGATTAGCTAAGTTTCTCTTTCAACATCAAAACCTAACTCAAAGCAGTTCAATGGGAATCAGGGGAACAGTTGGCTATGTTGCTCCAGAGTATGGCCTACAAGGTGAAGCATCAACAGATGGTGATATCTATAGTTTTGGGATTTTGCTGATAGAGCTCGTGACAAGGAACAGACCTACTGACAACATGTTCAAGGAAGGTTTCGACCTTCATATCTACGCCAAGGAAGCTTTGCCTGACCACGTGTTGAAAATTGTTGACCCAGTTCTTATAGAGAATGAAAGTGAAGAAATCCAGGAAAGAAGGTCAATTAAAGCCACACTTGAACAAAGGGTTGAGTGCGTGGTGGCTGTGGTTAACATTGGAGTGGCATGTTCCAACCCGTCACCACGAGATCGGATGAAGATAACTGATGCCATAAGAGAGCTGCAACAAGCTAGAGACATCATTTCAAATGCAAGACACAAGCGTACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_409356.p1 GENE.R_Transcript_409356~~R_Transcript_409356.p1 ORF type:5prime_partial len:574 (+),score=92.30,Pkinase|PF00069.21|2.3e-41,Pkinase_Tyr|PF07714.13|2.2e-37,LRR_8|PF13855.2|0.00042,LRR_8|PF13855.2|1.6e+02,LRR_8|PF13855.2|0.0024,LRR_8|PF13855.2|1.7e-07,LRR_4|PF12799.3|0.022,LRR_4|PF12799.3|2.3,LRR_4|PF12799.3|0.002,LRR_4|PF12799.3|1.8e-05,LRR_4|PF12799.3|0.057,LRR_1|PF00560.29|50,LRR_1|PF00560.29|13,LRR_1|PF00560.29|2.2e+03,LRR_1|PF00560.29|39,LRR_1|PF00560.29|0.052,LRR_1|PF00560.29|0.018,LRR_1|PF00560.29|5.6e+03,LRR_1|PF00560.29|2.3e+03 R_Transcript_409356:2-1723(+)
SFNNLSHLTRLLLGGNKFQGRIPPELGNCHSLLYLDLSHNEFNGTLPNEIFGGSAKFIEVNLSRNNIGGSLPLISQQTNLIRLDVSKNKLAGEVPNGLGKCPTLQYLNMEGNSFHGDIPPSFSSLESLQTLDLSHNNLSGPIPKYFSKFPLVNLVLSYNNFEGRVPTNGVFANASAISLVGNTKLCGGIPELHLPICTEKERKKRRMPLTLKLTVSLICALVVGVAMGVWMYLTCHKPKRKSVDTCLPISDAFLKVSYNMLLKATDGFSSENLLGTGAFGSVFKGFLEPYGRTVAVKVLNLQHKGASKSFIAECKALRNIRHRNIVGILSACSSTDFQGNDFKALVYEFMPNGSLERWLHYVGNLSLGQRVDIAIDVGCALDYLHNGCEFPMRHCDLKPSNILLDDDMVAHVGDFGLAKFLFQHQNLTQSSSMGIRGTVGYVAPEYGLQGEASTDGDIYSFGILLIELVTRNRPTDNMFKEGFDLHIYAKEALPDHVLKIVDPVLIENESEEIQERRSIKATLEQRVECVVAVVNIGVACSNPSPRDRMKITDAIRELQQARDIISNARHKRT*

Click here to download the sequence:
Link to NCBI Protein BLAST