Transcript Information: R_Transcript_40955.p1


Annotated TAIR IDAT1G52720.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15630.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19641007-19641360 | Forward length=117
E-Value4.1E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 161.418746996283
Replicate 263.130768143599
Replicate 386.0550412396
Condition 2: 8 Hour
Replicate 152.280630563037
Replicate 276.45004197054
Replicate 365.492973454639
Condition 3: 24 Hour
Replicate 149.173141156636
Replicate 236.361372765546
Replicate 336.085134754074


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40955.p1 GENE.R_Transcript_40955~~R_Transcript_40955.p1 ORF type:complete len:148 (+),score=3.02 R_Transcript_40955:37-444(+)
ATGGCAACCAATCTCCTCCCCATCCAACCAGCCCTGGGAATCCGCGCCTCCGCCGTCTCTAACAACACCCGCCGCGTCAAAACCTCCACCGCCAATCCAACTACCGTGAACGGTGGCGGGGGAGGAGGATCAAGCTGGTGGAGTCCGCTCTTCGGCTGGTCCTCTGAACCTGACTACCTTGACTCTTCTAACAAGAAGGAGGATCCGGTCAAGTCGGGGCTCCGATCCGAGAGCATTACGGATCCGGAAACAAAACGGGTCAAGTCAAAGTTCGCCCCGGGTTGCTTCACTGAGGAGAAGGCCAAACAGCTCCGAAAGATGACGTCTGATACCGAGTCCTTTCATGACGTCATGTATCATTCCGCTATCGCCTCTCGCCTTGCCACCGACTTCTCTCGCCGCCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40955.p1 GENE.R_Transcript_40955~~R_Transcript_40955.p1 ORF type:complete len:148 (+),score=3.02 R_Transcript_40955:37-444(+)
MATNLLPIQPALGIRASAVSNNTRRVKTSTANPTTVNGGGGGGSSWWSPLFGWSSEPDYLDSSNKKEDPVKSGLRSESITDPETKRVKSKFAPGCFTEEKAKQLRKMTSDTESFHDVMYHSAIASRLATDFSRRQ*

Click here to download the sequence:
Link to NCBI Protein BLAST