Transcript Information: R_Transcript_40957.p1


Annotated TAIR IDAT1G52720.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15630.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19641007-19641360 | Forward length=117
E-Value4E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.794512480059
Replicate 221.527852325571
Replicate 328.415952967379
Condition 2: 8 Hour
Replicate 110.228272699482
Replicate 214.577030567355
Replicate 312.292546432794
Condition 3: 24 Hour
Replicate 114.384955161663
Replicate 210.469268460717
Replicate 315.099745638429


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40957.p1 GENE.R_Transcript_40957~~R_Transcript_40957.p1 ORF type:complete len:158 (+),score=2.05 R_Transcript_40957:72-476(+)
ATGGCAACCAGTCTCCTCCCAATCCAACCAGCCCTGGGATTCCGCGCCTCCGCCGTCTCTAACAACACCCGCCGCGTCAAAACCTCCATCGCTAATCCAACCACCGTGAACGGCGGCGGGGGAGGAGGATCAAGCTGGTGGAGTCCGCTCTTCGGCTGGTCCTCTGAACCTGACTACATTGACTCTTCTAACAAGGAGGATCAGGTCAAGTCGGGGCTCCGATACGAGAGCATTACGGATCCGGAACCAAAACGGGTCAAGTCAAAGTTCGCCCCGGGTTGCTTCACTGAGGAGAAGGCCAAACAGCTCCGAAAGATGACGTCTGATACCGAGTCCTTTCATGACGTCATGTATCATTCCGCTATCGCCTCTCGCCTTGCCACCGACTTCTCTCGCCGCCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40957.p1 GENE.R_Transcript_40957~~R_Transcript_40957.p1 ORF type:complete len:158 (+),score=2.05 R_Transcript_40957:72-476(+)
MATSLLPIQPALGFRASAVSNNTRRVKTSIANPTTVNGGGGGGSSWWSPLFGWSSEPDYIDSSNKEDQVKSGLRYESITDPEPKRVKSKFAPGCFTEEKAKQLRKMTSDTESFHDVMYHSAIASRLATDFSRRQ*

Click here to download the sequence:
Link to NCBI Protein BLAST