Transcript Information: R_Transcript_409644.p1


Annotated TAIR IDAT1G56070.1
Annotated Gene NameRibosomal protein S5/Elongation factor G/III/V family protein
Annotated Gene Symbol(s)LOS1
Annotation TypeOrtholog
Chromosome Positionchr1:20968245-20971077 | Reverse length=843
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3053113930104
Replicate 20.54152240229608
Replicate 30.67135807726121
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_409644.p1 GENE.R_Transcript_409644~~R_Transcript_409644.p1 ORF type:5prime_partial len:853 (+),score=-46.19,GTP_EFTU|PF00009.23|4.2e-64,EFG_IV|PF03764.14|1.2e+04,EFG_IV|PF03764.14|7.8e-26,EFG_C|PF00679.20|1.3e-20,GTP_EFTU_D2|PF03144.21|1.4e-14,EFG_II|PF14492.2|3.8e-13 R_Transcript_409644:1-2559(+)
CTGTACTTTATTGAAGTCGTTGAGAAGATGGTGAACTTCACGGTGGACCAGGTCCGCCTGCTGATGGATGACTCCAAGCAGATCCGCAACATGTCCGTCATTGCCCACGTCGACCACGGCAAGTCGACCCTGTCTGACTCCCTTGTGGCCGCCGCCGGTATCATCAAGGTCGAGGACGCCGGTGACAAGCGTATCCTGGACACCCGCCCCGACGAGATTGCTCGTGGTATCACGATCAAGTCGACCGCGATTTCGATGCACTACAACGTCCCCGTTGATATGGTGCGCGACCTGAAGGAGAACGAGCGCGACTTCCTGATCAACCTGATCGACTCGCCCGGACACGTTGACTTCAGCTCTGAGGTGACCGCTGCCCTGCGTGTGACCGACGGTGCTCTCGTCGTCGTGGACTGCGTCGAAGGCGTGTGCGTGCAGACCGAGACCGTGCTGCGCCAGGCGCTGACCGAGCGTATCCGCCCCGTTGTGTTCATCAACAAGGTGGACCGCGCGATCATGGAGCTCCAGCTGGACCCCGAGGAGGCGTACCAGGGCTTCCAGAAGACGCTGCAGAACGTGAACGTCGTGATTGCGACGTACAACGACCCCATCATGGGTGAGCTGCAGGTGTCGCCCGAAACCGGCACGGTGGCGATGGGCAGCGGTCTGCAGGCGTGGGCGTTCAGCGTTCCCCGCTTCGCGCGCATGTACGCGTCCAAGTTCGGTGTCGAGGAGTCGAAGATGTGCCAGCGCCTGTGGGGTGACAACTACTTCGATGCCAAGAACAAGAAGTGGATCAAGTCCGACACGAACGAGCAGGGCGACCGCCTCAAGCGCGCCTTCTGCCAGTTCTGCTTGGACCCCATCTACCAGGTGTTCGATGCCGCCCTCAACGAGAAGAAGGACAAGCTCGAGAAGATGCTCGTCTCCCTGAAGATCAACATCACGACTGAGGAGAAGGAGCAGGCGCCGAAGAAGGTCGTGAAGACGATCATGTCGCGCTTCCTGCCCGCCGCCGAGACCCTGCTTGAGATGATCGTCGTGCAGCTGCCGTCGCCCAAGAAGGCGCAGGCGTACCGCGCTGAGATGCTCTACTCCGGCGAGCCCACCGACAAGTACTACGAGGGTATCAAGAACTGCGACCAGACCGCGCCCCTGATGCTGTACATCAGCAAGATGGTGCCGACTGCGGACAAGGGCCGCTTCTTCGCCTTCGGCCGTATCTTCTCCGGTAAGGTGCGCTCCGGCCAGAAGTGCCGTATCATGGGTAACAACTACCAGGTCGGCAAGAAGACTGATCTGTTCGAGGACAAGGCCATCCAGCGTACCGTGCTGATGATGGGTCGCTACCAGGAGGCCGTCGAGGACATGCCCTGCGGTAACGTCGTCGGCTTGGTCGGTGTCGACAAGTACATCGTCAAGTCCGCCACGATCACCGACGACGGTGAGGCCCTCGCGTACCCGCTGCGCGACATGAAGTACTCCGTGTCGCCCGTCGTGCGTGTCGCCGTCGAGGCCAAGAACCCCGCCGATCTGCCCAAGCTGGTCGAGGGTCTGAAGCGCCTGTCGAAGTCCGACCCCCTGGTGGTCTGCACCATCGAGGAGTCCGGCGAGCACATCGTTGCCGGTGCTGGTGAGCTCCACCTTGAGATCTGCCTGAAGGATCTCCAGGACGACTTCATGAACGGCGCCCCGCTCAAGATCTCCGAGCCCGTCGTGTCGTTCCGCGAGACCGTGACCGACGTGTCGAGCGTCCAGTGCCTGTCCAAGTCCGCGAACAAGCACAACCGTCTGTTCTGCCGCGGTGCGCCCCTCACCGAGGAGCTGTGCATCGACATCGAGGAGGGCAAGGGCTCTGCCGACCAGGACCCCAAGCTCCGCGCCAAGTTCCTGCAGGAGAAGTACGAGTGGGATGGCACTGACGCCAAGAAGATCTGGTGCTACGGCCCTGATGGCAGCGGTCCCAACGTGATCGTCGACGTGACGAAGGGTGTTGACAACATGGGCGAGATGAAGGACTCGTTCATCGCTGCCTGGCAGTGGGCGACGAAGGAGGGTGTGCTGTCCGACGAGAACATGCGCGGTGTGCGCATCAACATCGAGGACATCACGATGCACGCCGACGCGATCCACCGTGGTGGCGGTCAGATCATCCCCACCGCGCGCCGTGTGGCGTATGCCTGCTGCCTGACTGCGCAGCCGCGCCTGATGGAGCCCGTGTTCATGGTCGACATCCAGACCGTCGAGACCGCGATGGGTGGCATCTACAACGTGCTCACCCGCCGCCGTGGTATCATCAACGGTGAGGAGAACCGCCCCGGCACGCCCATCTACAACGTGCGCGCCTTCCTGCCCGTCGCCGAGTCGTTCGGCTTCACGGCTGACCTCCGCGCCGCGACGTCCGGCCAGGCCTTCCCCCAGCTGGTCTTCGACCACTGGCAGCAGTACCCCGGCGATCCGCTCGTCCCTGGCCTCGCGGCCGACACCGTGCGCACCATCCGCGTGCGCAAGGGCCTGAAGCCTGAAATTCCCGGGCTTGACCAGTTCATGGACAAGCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_409644.p1 GENE.R_Transcript_409644~~R_Transcript_409644.p1 ORF type:5prime_partial len:853 (+),score=-46.19,GTP_EFTU|PF00009.23|4.2e-64,EFG_IV|PF03764.14|1.2e+04,EFG_IV|PF03764.14|7.8e-26,EFG_C|PF00679.20|1.3e-20,GTP_EFTU_D2|PF03144.21|1.4e-14,EFG_II|PF14492.2|3.8e-13 R_Transcript_409644:1-2559(+)
LYFIEVVEKMVNFTVDQVRLLMDDSKQIRNMSVIAHVDHGKSTLSDSLVAAAGIIKVEDAGDKRILDTRPDEIARGITIKSTAISMHYNVPVDMVRDLKENERDFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETVLRQALTERIRPVVFINKVDRAIMELQLDPEEAYQGFQKTLQNVNVVIATYNDPIMGELQVSPETGTVAMGSGLQAWAFSVPRFARMYASKFGVEESKMCQRLWGDNYFDAKNKKWIKSDTNEQGDRLKRAFCQFCLDPIYQVFDAALNEKKDKLEKMLVSLKINITTEEKEQAPKKVVKTIMSRFLPAAETLLEMIVVQLPSPKKAQAYRAEMLYSGEPTDKYYEGIKNCDQTAPLMLYISKMVPTADKGRFFAFGRIFSGKVRSGQKCRIMGNNYQVGKKTDLFEDKAIQRTVLMMGRYQEAVEDMPCGNVVGLVGVDKYIVKSATITDDGEALAYPLRDMKYSVSPVVRVAVEAKNPADLPKLVEGLKRLSKSDPLVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMNGAPLKISEPVVSFRETVTDVSSVQCLSKSANKHNRLFCRGAPLTEELCIDIEEGKGSADQDPKLRAKFLQEKYEWDGTDAKKIWCYGPDGSGPNVIVDVTKGVDNMGEMKDSFIAAWQWATKEGVLSDENMRGVRINIEDITMHADAIHRGGGQIIPTARRVAYACCLTAQPRLMEPVFMVDIQTVETAMGGIYNVLTRRRGIINGEENRPGTPIYNVRAFLPVAESFGFTADLRAATSGQAFPQLVFDHWQQYPGDPLVPGLAADTVRTIRVRKGLKPEIPGLDQFMDKL*

Click here to download the sequence:
Link to NCBI Protein BLAST