Transcript Information: R_Transcript_409956.p1


Annotated TAIR IDAT5G64270.1
Annotated Gene Namesplicing factor, putative
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25706909-25710718 | Forward length=1269
E-Value3E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.079360699803125
Replicate 20.18257652535911
Replicate 30.29878353386286
Condition 2: 8 Hour
Replicate 10.10646028237933
Replicate 20.097221225396459
Replicate 30.31568018470238
Condition 3: 24 Hour
Replicate 10
Replicate 20.095892429959032
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_409956.p1 GENE.R_Transcript_409956~~R_Transcript_409956.p1 ORF type:3prime_partial len:230 (+),score=55.55,SF3b1|PF08920.6|4.1e+02,SF3b1|PF08920.6|2e-27 R_Transcript_409956:105-689(+)
ATGGTAAAAAGAGAAGAATATGAAGTCAGACAAGCAATTAAAAAGAAAATGGAAGAAAAACAAAAAGAAGAGTTAGAAAATGAAAGAAAGAGAGAATTAGAAAAAGAGAAAGAAAAAGAGAAAGAAAAAAAAAAGGAAAAAGAGAAGAAAAAGAGAAGATGGGACGATGAAGGAGAAACTAAAGAAGAAGGTGGACCTCAGAAAAAGAAAACAAAATCTGATGGACCAAGCAGATGGGACGTAACACCAGATATTCTCAGCCAACAACAACCAGATGATAAAGTTACTAGTACCCCAAAACGTACAAGATCACGATGGGATGAAACACCTGAACAAATATCAACCGGAAATGCAACACCTCTTTTAACTCGAACACCTGTTGGAAATCTTGGACAACAAACACCCATTATATCTCATGTCACAGTTACACCCGAAATGATTCACCAAGGTAGATGGGCTGCAGAAATAAGCGAACGAAACAAACCTTGGACAGAAGAAGAGTTAGAAGCTTTGTTCCCAGTTGAAGGTTATAAAATTTTAGAACCACCACCTGGATATCAGCCACCACCAATTAAATATACTGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_409956.p1 GENE.R_Transcript_409956~~R_Transcript_409956.p1 ORF type:3prime_partial len:230 (+),score=55.55,SF3b1|PF08920.6|4.1e+02,SF3b1|PF08920.6|2e-27 R_Transcript_409956:105-689(+)
MVKREEYEVRQAIKKKMEEKQKEELENERKRELEKEKEKEKEKKKEKEKKKRRWDDEGETKEEGGPQKKKTKSDGPSRWDVTPDILSQQQPDDKVTSTPKRTRSRWDETPEQISTGNATPLLTRTPVGNLGQQTPIISHVTVTPEMIHQGRWAAEISERNKPWTEEELEALFPVEGYKILEPPPGYQPPPIKYTA

Click here to download the sequence:
Link to NCBI Protein BLAST