Transcript Information: R_Transcript_410209.p2


Annotated TAIR IDAT5G20935.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3148 (InterPro:IPR021495); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7103487-7103945 | Forward length=108
E-Value4.6E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0843203182396
Replicate 24.0690504682748
Replicate 32.486002529815
Condition 2: 8 Hour
Replicate 11.5185032525423
Replicate 21.3867213544921
Replicate 31.6885219181755
Condition 3: 24 Hour
Replicate 11.0678049873351
Replicate 21.3677679932141
Replicate 32.0360655522695


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_410209.p2 GENE.R_Transcript_410209~~R_Transcript_410209.p2 ORF type:complete len:129 (+),score=20.81,DUF3148|PF11347.4|5.7e+03,DUF3148|PF11347.4|5.4e-24 R_Transcript_410209:71-457(+)
ATGTCACTCTCCCTATCTAGCATCATATCTAAGCCATTTTCAAGTCCCCAAAACACTTTGAGTTCAACAACACTGCTTCCCATCACCCAAATCCGAAACCGAGGTCTGGTGATCAGGTGTGAATTGAATGACCAAGCATCAACAAGCAGCAGCAATGGTTCTCTGAAGCTAGTAATAGGTTCTCCTGTTATCATCACTGAAGCCCCCAAAATGATCAAGACTGCCGCTTCGGTCCCTTGCCTTAGGGTCAATGCCGACTTGGTTAAGGCTGGTGATGTTGGAAGGATTGTATCTGGAAAACCCATGGATGTCTGGGCTGTTCGCTTGAGGCTTGGGACATATCTCATAGACCGAAAATACTTCAAGCCATTAGAATTGGATGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_410209.p2 GENE.R_Transcript_410209~~R_Transcript_410209.p2 ORF type:complete len:129 (+),score=20.81,DUF3148|PF11347.4|5.7e+03,DUF3148|PF11347.4|5.4e-24 R_Transcript_410209:71-457(+)
MSLSLSSIISKPFSSPQNTLSSTTLLPITQIRNRGLVIRCELNDQASTSSSNGSLKLVIGSPVIITEAPKMIKTAASVPCLRVNADLVKAGDVGRIVSGKPMDVWAVRLRLGTYLIDRKYFKPLELDE*

Click here to download the sequence:
Link to NCBI Protein BLAST