Transcript Information: R_Transcript_41065.p1


Annotated TAIR IDAT2G27880.1
Annotated Gene NameArgonaute family protein
Annotated Gene Symbol(s)AGO5
Annotation TypeOrtholog
Chromosome Positionchr2:11871488-11876712 | Forward length=997
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.9803092122475
Replicate 26.0675379581402
Replicate 37.2625311505473
Condition 2: 8 Hour
Replicate 18.0431739327749
Replicate 28.2051884510795
Replicate 310.585294758874
Condition 3: 24 Hour
Replicate 112.266437541621
Replicate 28.7349829909667
Replicate 313.856145690562


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_41065.p1 GENE.R_Transcript_41065~~R_Transcript_41065.p1 ORF type:complete len:962 (+),score=166.64,Piwi|PF02171.13|1.1e-99,ArgoN|PF16486.1|1.7e-25,PAZ|PF02170.18|3.4e-24,ArgoL1|PF08699.6|1.5e-18,ArgoL2|PF16488.1|6e-12,ArgoMid|PF16487.1|1.5e-07 R_Transcript_41065:201-3086(+)
ATGTCGTACAGAGGAGGTAGCAGCGGTGGTGGTGGTTACGGAGGTGGGAGAGGCGGAAGCGGTCGTGGCGGAGGCGGGGGTGGTAGAGGTGGTGGTTACGGAGGCGGAGGTGGGTACCCACAAGGCGGGGGTGGTAGAGGAGGCGGTGGTCGTGCAGAAGGCCGTGGTGGTGGTGGTCGCGGAGGAGGAAGGGGTGGGTTCCAAAGAGAATCACCGGTGCCGCCACTAACGGTACAACAATGGGAAGACGCTGACCCAACCTCCCTAAACAAACAGATGCAGAAGAAGCTGGCAGTTTCGGCCCCATCCCGACAGCCATCTTCATCAAAGTCCACGAAACCACCTCACCGGCCGGGTTTCGGGCGGGTCGGGTTGCCTTGCAAAGTTCGGGCTAACCACTTTCTGGTTCAACTCACTGAACGAGACCTCCATCACTACGATGTTACTATTACTCCAGAGGTCACCAACAAAATTGTGTGCAGAGATTTAGTGGATAGGCTTGTAAAAGCATACAGGCAATCCCACTTGGGGAAGAGGATACCTGCATATGATGGAAAGAAGAGCCTGTACACTGCTGGTCCTTTGCCTTTCCAGTCTAAGGAATTCATTATTGAACTGCCTGCTCGTCCAGGCCGCTCTGAAAGTGATGCAAGGAAGTTCACTGTGGCGATTAAGTTTGCTGCTAAGGTTGAAATCCACAATCTGCTGGAGTATGTTCGTGGAAGGAGTTCTGAGTCTCCTCATGATTCAGTTCAAGTGCTTGATGTTGTGCTCCGTTCTGCCAAGGACTTAAGCAATTATGTCATTATTGGGAGGTCTTTCTACTCAGATAAACTGGGTGCAGGGCACCTGGCTGAGGGTTTAGAGTTCTGGAGGGGTTACTATTCAAGTATCAGACCAACACAAATGGGCCTTTCGCTAAACATTGATGCATCTGCACGGCCATTTTATAAGCCTGTGGAAGTTGTTGAGTTCATAAGAGAGTATCTGAATTTGAGGGACGTGTCCAGGCCCCTATCTGATGCACAGCGTGTGAAGGTCAAGAAAGCCTTAAAAGGTGTTACCATTGAAACAAACCACAGAGGTTTCAGAAGAACTGACAAAGTGATTGGCATCTCAAATGAACCATCGAATCAGCTGATGTTCTCACTCAGTAACGAGGAGGATAAGCAGACTTCTGTCTTTCAGTATTTCAAACAAAAGTACAAGAAGCAGCTCCAATATCCCTTGTTACCATGCATTCAGATTGGCCAGGCTAAGAGGCCTAACTACCTGCCTATGGAGCTCTGCACTATTGTTCATGGTCAGAAATACTTGAAGAAGTTGAATGAGAGGCAAGTGTCTGACCTTTTGAAAGCAACTTGCCAAAGACCTCACCAAAGGGAGGAAAATATTAGGAAGATGATACAAGACAACAGATATAGTGACAACCAAATGGTGAGGCAGGAGTTTGGCATGCAAATCTCTGATGTTTGTGCAACAGTTGATGCCCGAATTTTGCCTCCCCCGAAGTTGAAGTATGGAGATGGGCCAGAGGTTGCTCCAGCATATGGTCAGTGGAACATGATTAAAAAGAAAATGTTCCATGGTGCAACGGTGGATTGTTGGACATGTGTGAGCTTCTCACGAAATATGGATGGCCGCTTAGTGCAACAGTTCTGTGATTCCCTTGCTTGTATGTGCGCTGAGAAGGGCATGAAATTTACTCGAACGCCTGGTGTTCCTATACGCCCTGGTAACCCGAATGATATTGAGGGGTCTCTCAGAAGGGTGCTATCTGATGTTGTGAAAGCAGCAAAGCGTCTAAAGCTGTTGATAATAATATTGCCTGATGTATCTGGCTCCTATGGGAAAATTAAACAAATATGTGAAACTGAACTGGGAATAGTATCTCAATGCTGTCGGCCAGATAAGGCCTGTGAGATAAAGCCTCAATATCTGGAGAATGTGGCATTGAAAATTAATGTGAAGGCTGGAGGCACGAACGCTGTGTTGCTGGACGCCTTTAACAAGAACATTCCTCGTCTGACTGATCGCCCGACAATTATATTTGGTGCTGATGTTACACATGCCGCGCCAGGGGAGGACTCCACTGCCTCAATAGCTTCGGTGGTTGCCTCGATGGATTGGCCAGGAGTGACAAAGTACAAGGGGCTTGTCTCAGCCCAGGGTCAAAGGGAGGAAATTATCCAGGATCTCTACAAAATTGTTGATCATCCGGTTATGGGTCGGGTACATGGAGGAATGATCAGGGAGTTGCTGATTTCCTTCAAAATGGCAACTAATCGAAAACCTGATAGGATCATCTTCTTTAGGGATGGAGTCAGCGAAGGTCAGTTTGCGCAGGTTCTCCTTCATGAGATGGATGCAATACGCAAGGCATGTGCCTCCTTGGAAGATGGTTATATGCCACCTGTGACGTTTGTGGTGGTCCAAAAAAGGCATCATACCCGTTTGTTTCCAGTTGATCGAGACTTAGTAGACAAGAGTGGCAACATAATGCCTGGTACTGTGGTTGACACCAAGATCTGTCATCCGTCAGAGTTTGACTTCTACTTGTGCAGTCACGCTGGAATTCAGGGAACAAGCCGACCCACACACTACCATGTTCTGTATGATGAGAACGACTTCACAGCAGACTTACTTCAGCTATTGACAAACAGCTTGTGTTACACGTATGCCAGGTGCACACGGTCTGTTTCAGTTGTACCTCCTGCCTACTATGCACATCTTGCTGCCTTCCGTGCACGTTACTATGTCGAAGGCACCGCAGCGTCCGAGAGTGGATCTACTGGGGGGAAGGATCTAACTAAGGACAAGCAATTGGAGGTCCGTACACTTCCACAGATCAAGGATAACGTCAAGGAAGTCATGTTCTACTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_41065.p1 GENE.R_Transcript_41065~~R_Transcript_41065.p1 ORF type:complete len:962 (+),score=166.64,Piwi|PF02171.13|1.1e-99,ArgoN|PF16486.1|1.7e-25,PAZ|PF02170.18|3.4e-24,ArgoL1|PF08699.6|1.5e-18,ArgoL2|PF16488.1|6e-12,ArgoMid|PF16487.1|1.5e-07 R_Transcript_41065:201-3086(+)
MSYRGGSSGGGGYGGGRGGSGRGGGGGGRGGGYGGGGGYPQGGGGRGGGGRAEGRGGGGRGGGRGGFQRESPVPPLTVQQWEDADPTSLNKQMQKKLAVSAPSRQPSSSKSTKPPHRPGFGRVGLPCKVRANHFLVQLTERDLHHYDVTITPEVTNKIVCRDLVDRLVKAYRQSHLGKRIPAYDGKKSLYTAGPLPFQSKEFIIELPARPGRSESDARKFTVAIKFAAKVEIHNLLEYVRGRSSESPHDSVQVLDVVLRSAKDLSNYVIIGRSFYSDKLGAGHLAEGLEFWRGYYSSIRPTQMGLSLNIDASARPFYKPVEVVEFIREYLNLRDVSRPLSDAQRVKVKKALKGVTIETNHRGFRRTDKVIGISNEPSNQLMFSLSNEEDKQTSVFQYFKQKYKKQLQYPLLPCIQIGQAKRPNYLPMELCTIVHGQKYLKKLNERQVSDLLKATCQRPHQREENIRKMIQDNRYSDNQMVRQEFGMQISDVCATVDARILPPPKLKYGDGPEVAPAYGQWNMIKKKMFHGATVDCWTCVSFSRNMDGRLVQQFCDSLACMCAEKGMKFTRTPGVPIRPGNPNDIEGSLRRVLSDVVKAAKRLKLLIIILPDVSGSYGKIKQICETELGIVSQCCRPDKACEIKPQYLENVALKINVKAGGTNAVLLDAFNKNIPRLTDRPTIIFGADVTHAAPGEDSTASIASVVASMDWPGVTKYKGLVSAQGQREEIIQDLYKIVDHPVMGRVHGGMIRELLISFKMATNRKPDRIIFFRDGVSEGQFAQVLLHEMDAIRKACASLEDGYMPPVTFVVVQKRHHTRLFPVDRDLVDKSGNIMPGTVVDTKICHPSEFDFYLCSHAGIQGTSRPTHYHVLYDENDFTADLLQLLTNSLCYTYARCTRSVSVVPPAYYAHLAAFRARYYVEGTAASESGSTGGKDLTKDKQLEVRTLPQIKDNVKEVMFYC*

Click here to download the sequence:
Link to NCBI Protein BLAST