Transcript Information: R_Transcript_410667.p1


Annotated TAIR IDAT1G24620.1
Annotated Gene NameEF hand calcium-binding protein family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8723893-8724453 | Reverse length=186
E-Value3.9E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.10992827443088
Replicate 30.59965281665321
Condition 2: 8 Hour
Replicate 10
Replicate 20.23414535959357
Replicate 30.095034610577942
Condition 3: 24 Hour
Replicate 10.36059383080163
Replicate 20.34641767890959
Replicate 30.11459531249685


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_410667.p1 GENE.R_Transcript_410667~~R_Transcript_410667.p1 ORF type:complete len:191 (+),score=54.63,EF-hand_1|PF00036.28|2.4e-08,EF-hand_1|PF00036.28|7.8e-06,EF-hand_1|PF00036.28|7.6e-08,EF-hand_1|PF00036.28|4.2e-08,EF-hand_5|PF13202.2|2.3e-08,EF-hand_5|PF13202.2|8.2e-05,EF-hand_5|PF13202.2|7.3e-05,EF-hand_5|PF13202.2|0.0003,EF-hand_6|PF13405.2|9.3e-08,EF-hand_6|PF13405.2|9e+02,EF-hand_6|PF13405.2|0.031,EF-hand_6|PF13405.2|2.1e-07,EF-hand_6|PF13405.2|0.0049,EF-hand_7|PF13499.2|2.4e-12,EF-hand_7|PF13499.2|1.4e-11,EF-hand_8|PF13833.2|0.0019,EF-hand_8|PF13833.2|3.6e-09,EF-hand_8|PF13833.2|2.4e-10,SPARC_Ca_bdg|PF10591.5|5.1e-05,SPARC_Ca_bdg|PF10591.5|0.31,EF-hand_9|PF14658.2|0.0017,EF-hand_9|PF14658.2|0.54,EF-hand_4|PF12763.3|5.3,EF-hand_4|PF12763.3|11,EF-hand_4|PF12763.3|52,EF-hand_4|PF12763.3|0.2 R_Transcript_410667:78-650(+)
ATGGGTTTTGCACAAACATTTTTTAAGAAGAAAAAGAAAAATTCAATTGGAAATCCAAATTCTATACACGAAAATTCCTCCTCGGAATCACGTTCATCATCATTCCACTCTGATTCCATCCCTGTTGAAGAGCTTGAACAAGTTTTCAAGAAATTTGATGTAAATGGTGATGGGAAGATTTCATCATCTGAACTAGGATCAATGATGGGAAGTTTGGGACAAGAAGTGACAGAAGAAGAGTTACAAATTTTGATCAAGGAGGTTGATGCAGATGGTGATGGATTCATTGATCTCAATGAATTCATCACATTAAATACAAAAGATGTTGATGCTAATGAGGTTTTGAGAAATCTAAAAGAGGCATTTTCTATTTATGATGCTGACGGTAATGGTAATATCACAGCCGAGGAACTGCAAATGGTGATGAAGAGTCTGGGAGACAACTGCTCTATAGGTGAATGCAAGAAGATGATTAGTGGGGTTGACAGCGATGGTGATGGAACCATTAATTTTGAAGAATTCAAAGTAATGATGATGGTAGGATCACGCTTTGATGCGATGGCAAAGGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_410667.p1 GENE.R_Transcript_410667~~R_Transcript_410667.p1 ORF type:complete len:191 (+),score=54.63,EF-hand_1|PF00036.28|2.4e-08,EF-hand_1|PF00036.28|7.8e-06,EF-hand_1|PF00036.28|7.6e-08,EF-hand_1|PF00036.28|4.2e-08,EF-hand_5|PF13202.2|2.3e-08,EF-hand_5|PF13202.2|8.2e-05,EF-hand_5|PF13202.2|7.3e-05,EF-hand_5|PF13202.2|0.0003,EF-hand_6|PF13405.2|9.3e-08,EF-hand_6|PF13405.2|9e+02,EF-hand_6|PF13405.2|0.031,EF-hand_6|PF13405.2|2.1e-07,EF-hand_6|PF13405.2|0.0049,EF-hand_7|PF13499.2|2.4e-12,EF-hand_7|PF13499.2|1.4e-11,EF-hand_8|PF13833.2|0.0019,EF-hand_8|PF13833.2|3.6e-09,EF-hand_8|PF13833.2|2.4e-10,SPARC_Ca_bdg|PF10591.5|5.1e-05,SPARC_Ca_bdg|PF10591.5|0.31,EF-hand_9|PF14658.2|0.0017,EF-hand_9|PF14658.2|0.54,EF-hand_4|PF12763.3|5.3,EF-hand_4|PF12763.3|11,EF-hand_4|PF12763.3|52,EF-hand_4|PF12763.3|0.2 R_Transcript_410667:78-650(+)
MGFAQTFFKKKKKNSIGNPNSIHENSSSESRSSSFHSDSIPVEELEQVFKKFDVNGDGKISSSELGSMMGSLGQEVTEEELQILIKEVDADGDGFIDLNEFITLNTKDVDANEVLRNLKEAFSIYDADGNGNITAEELQMVMKSLGDNCSIGECKKMISGVDSDGDGTINFEEFKVMMMVGSRFDAMAKD*

Click here to download the sequence:
Link to NCBI Protein BLAST