Transcript Information: R_Transcript_41075.p1


Annotated TAIR IDAT2G25580.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:10888102-10889949 | Forward length=615
E-Value9.3E-148
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.020445481033
Replicate 28.2585448304106
Replicate 39.7353634783648
Condition 2: 8 Hour
Replicate 19.7127264290739
Replicate 210.695955147367
Replicate 314.279267021371
Condition 3: 24 Hour
Replicate 113.20073915593
Replicate 29.2999674988601
Replicate 313.570376905876


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_41075.p1 GENE.R_Transcript_41075~~R_Transcript_41075.p1 ORF type:complete len:600 (+),score=109.18,DYW_deaminase|PF14432.2|1.4e-36,PPR|PF01535.16|39,PPR|PF01535.16|71,PPR|PF01535.16|0.00014,PPR|PF01535.16|2.9e-05,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|1.9,PPR|PF01535.16|2.5e+03,PPR_2|PF13041.2|0.28,PPR_2|PF13041.2|0.00022,PPR_2|PF13041.2|8.8e-06,PPR_2|PF13041.2|61,PPR_2|PF13041.2|1.4e+04,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|0.0095,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|0.21,PPR_3|PF13812.2|3.7e+02,PPR_3|PF13812.2|0.063,PPR_3|PF13812.2|0.078,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|71 R_Transcript_41075:271-2070(+)
ATGAAACGGTATCATTATCCTCTTTTCATCTTCAGACGGTTTCATACTCGATGTTTAGACCCTAAGATCAGTTGGCATAATGGGGCTTTAATCTATCATGTACGTAATGGAAGATCAGTGGTCTTGAGACAATATTCAAGTGGGTTTGCTGGTGTAAATACGGTTCCGGAAAATTTTGATGATATTGATACAGTTGGGGCTGGCAAAGTCCCCCCAACTATTAGTGATTTTCATCAACAGGGATACAGCCAGAATTTTGGACAGTTTCAGCATCAGTCTAGCCCGAGAAATCACTATGCGAATGATTGGACATGTCAACAAAATTTTGGTAACCATTCGATGGCGAACGTTGGATCAAATGACCTGTCTAGAGGGAATAATAAAGTAGCAGGGAATCCTGGTGGTTATCAACAAGATGTTTCGGGTACTCCATTGAGTTCAAATGGTTTTCATCAAGCGAATCCTGGTGGTCATCTGGGTAATTCTAGTGGATTCTATAATGTTCATTCAGGACCTCATCACCAGAACTTTATTGGATCTCACAATGCCCAGGTCCTTACGGAATCACCGTTGAGCACTCCTTATAATGGGGTTTCAGCAAATGATGTTGGTAAAAATGTCGAGGGCATGCTGGAGGAGTTTGATACATACTGTAAGGAGTGGGATCTTGAAAATGCTGTGAACTCCATGAGAATGATGGGTGAGAAGAGAGTTCATATAGATTTACCTCGGTACTTGATTCTAATTAAAGCATGTGGGGAGGCAAAAGCTTCGAAAGAAGCAAAGGTTGTGCATGAGCAACTCATTAAATTCATGTCTCCTATCACAGTTAGCACTTTTAACCGGATTCTTGAGATGTATGGTAAATGTGGGTTAATGGAGGATGCATATAGTACATTTAACCAAATGCCTGAGCGCAATTTAACATCTTGGGACACTATGATTTCATGGTTTGCAAGAAATGGTCTCGGAGAGGAGGCGATTGATGTGTTCACTCGATTTAAGGAGTCTGGACTGAAACCAGATGGCCAAATGTTCTTTGGGGTATTTGATGCTTGTGCTGTCCTCGGTGATGTCACAGAGGGAATGTTGCATTTTGAGTCAATGAGCAAGACATATGGCATCGTTCCATCCATGGCTCACTATGCCAGCATAGTACAAATGTTTGGTAGTGCAGGTTATCTGGATGGAGCTTTAGAGTTCATTGAGAGTATGCCTGTGGAGCCAAGTATAGAGGTCTGGGAAGGCCTGATGAACATATCCAGGGTCCAAGGGAACATAGAACTTGGTGATCGTTGTGCACAGATTGTGGAGCAGCTGGACCCTTCTCGCATGAGTAAAGACTCGAAGGCTGGACTCCTGCCAGTTAAAGATTCAGATACTCTGAAGAAGAAAGTAAAGAAAGCAAACCCTTTGGAGCATACAAAACATGAGTACAGAGCAGGTGATAGATCTCATCCAGAAAATGACAAGATTTATGCAATTTTGAGGGGAATGAAAGAATCAATGAAAGAGGCTGGTTATATACCAGAAACTAGGTTTGTTCTTCATGATATTGACCCAGAGGGCAAAGAGGAAGCTATTATGGCTCATAGTGAGAGACTTGCTTGCACCTATGCCCTTATTACCAGTGCTGCCCGTATGCCAATTCGTATAATTAAGAACCTTCGTGTTTGTGGTGATTGCCACAATGCATTTAAGATCATTTCAAAGCTCGTTGGTAGGGAGGTTATTATGAGAGATGCCAAGAGGTTTCACCATTTTAAAGATGGAAAATGTTCCTGCAATGACTACTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_41075.p1 GENE.R_Transcript_41075~~R_Transcript_41075.p1 ORF type:complete len:600 (+),score=109.18,DYW_deaminase|PF14432.2|1.4e-36,PPR|PF01535.16|39,PPR|PF01535.16|71,PPR|PF01535.16|0.00014,PPR|PF01535.16|2.9e-05,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|1.9,PPR|PF01535.16|2.5e+03,PPR_2|PF13041.2|0.28,PPR_2|PF13041.2|0.00022,PPR_2|PF13041.2|8.8e-06,PPR_2|PF13041.2|61,PPR_2|PF13041.2|1.4e+04,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|0.0095,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|0.21,PPR_3|PF13812.2|3.7e+02,PPR_3|PF13812.2|0.063,PPR_3|PF13812.2|0.078,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|71 R_Transcript_41075:271-2070(+)
MKRYHYPLFIFRRFHTRCLDPKISWHNGALIYHVRNGRSVVLRQYSSGFAGVNTVPENFDDIDTVGAGKVPPTISDFHQQGYSQNFGQFQHQSSPRNHYANDWTCQQNFGNHSMANVGSNDLSRGNNKVAGNPGGYQQDVSGTPLSSNGFHQANPGGHLGNSSGFYNVHSGPHHQNFIGSHNAQVLTESPLSTPYNGVSANDVGKNVEGMLEEFDTYCKEWDLENAVNSMRMMGEKRVHIDLPRYLILIKACGEAKASKEAKVVHEQLIKFMSPITVSTFNRILEMYGKCGLMEDAYSTFNQMPERNLTSWDTMISWFARNGLGEEAIDVFTRFKESGLKPDGQMFFGVFDACAVLGDVTEGMLHFESMSKTYGIVPSMAHYASIVQMFGSAGYLDGALEFIESMPVEPSIEVWEGLMNISRVQGNIELGDRCAQIVEQLDPSRMSKDSKAGLLPVKDSDTLKKKVKKANPLEHTKHEYRAGDRSHPENDKIYAILRGMKESMKEAGYIPETRFVLHDIDPEGKEEAIMAHSERLACTYALITSAARMPIRIIKNLRVCGDCHNAFKIISKLVGREVIMRDAKRFHHFKDGKCSCNDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST