Transcript Information: R_Transcript_411149.p1


Annotated TAIR IDAT5G63380.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25387581-25390026 | Reverse length=562
E-Value1E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17219774485584
Replicate 20
Replicate 30.21610129807691
Condition 2: 8 Hour
Replicate 10.23099872591741
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_411149.p1 GENE.R_Transcript_411149~~R_Transcript_411149.p1 ORF type:5prime_partial len:106 (+),score=0.87,AMP-binding|PF00501.24|3.2e-16 R_Transcript_411149:2-319(+)
GCAAAACATAAATTCGGTCCAAATGTGGAATTTGTTTTTGCATTAAACGGAGGTGAAACGTTTGGTCCATTCCTTTCATTATCCACCAAACCAACATCGATCGGAAAAACGCTTCCTAACTCAGAAACTAAAATCGTTGATCAAAATAATAAAATCGTCCCAATCGGATCAGCGGGCCGCCTTCTCACAAAAGGAGCTCATGTAATGAGAGGATATTATAACAAAAATACACCCGAAACCGTTATCAGCAAAGATGGTTGGTTATCAACACCATACACTGCCACTGCCGATGAAGAAGGAAATTTCTATTTAGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_411149.p1 GENE.R_Transcript_411149~~R_Transcript_411149.p1 ORF type:5prime_partial len:106 (+),score=0.87,AMP-binding|PF00501.24|3.2e-16 R_Transcript_411149:2-319(+)
AKHKFGPNVEFVFALNGGETFGPFLSLSTKPTSIGKTLPNSETKIVDQNNKIVPIGSAGRLLTKGAHVMRGYYNKNTPETVISKDGWLSTPYTATADEEGNFYLV*

Click here to download the sequence:
Link to NCBI Protein BLAST