Transcript Information: R_Transcript_411430.p1


Annotated TAIR IDAT5G04220.2
Annotated Gene NameCalcium-dependent lipid-binding (CaLB domain) family protein
Annotated Gene Symbol(s)SYTC, ATSYTC, NTMC2TYPE1.3, NTMC2T1.3, SYT3
Annotation TypeHomolog
Chromosome Positionchr5:1155985-1158620 | Reverse length=540
E-Value2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60843203182396
Replicate 20.23329222684776
Replicate 30.12725965331196
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.10084228122437
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_411430.p1 GENE.R_Transcript_411430~~R_Transcript_411430.p1 ORF type:internal len:180 (+),score=17.64,C2|PF00168.26|1.3e-30 R_Transcript_411430:3-539(+)
AAGAGTTTAACTGTAATTGTTGTTGAAGCAAAAAACTTAGTTGCTGCGGATAAAGGAGGAACGAGTGACCCCTATGTTAAACTTCAAATTTCTGGTCAATCACAACAAAAAACAAAAACAATCAAAAAATGTTTAAATCCAAAATGGAACGAATCGTTCAAATTCACTGTTATTGATCCAAAATCTTCTTCATTAACGATAAACGTATTTGACCATGACGCGATCGGACGTGATGACCCACTCGGATCAGTGAATATTCCGTTATCAACAATTCAAAAAGGGGAGAGTTCAGCATGGCATAACCTCGTTGGAGTACCGAAAGGACAAATATATTTGACATTTAATGCACACGATTTTGGTGTGGAAGCAACTCAAGCGCCAGCAAATAATCAAGCAACCGGATATCCTTCCCAAGCTGCTCCACAAGGTGGACCGCAAGGTTATGGATCACAAGCACCACCATTCCAAGGTGGTTATCCTGCTTATCCATCTCAACCTGGTTACCCTTCTCAAGTTGGTTATCCTCCTTCTCCGTAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_411430.p1 GENE.R_Transcript_411430~~R_Transcript_411430.p1 ORF type:internal len:180 (+),score=17.64,C2|PF00168.26|1.3e-30 R_Transcript_411430:3-539(+)
KSLTVIVVEAKNLVAADKGGTSDPYVKLQISGQSQQKTKTIKKCLNPKWNESFKFTVIDPKSSSLTINVFDHDAIGRDDPLGSVNIPLSTIQKGESSAWHNLVGVPKGQIYLTFNAHDFGVEATQAPANNQATGYPSQAAPQGGPQGYGSQAPPFQGGYPAYPSQPGYPSQVGYPPSPY

Click here to download the sequence:
Link to NCBI Protein BLAST